Bordetella genomosp. 13: CAL15_22460
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Entry
CAL15_22460 CDS
T05441
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bgm
Bordetella genomosp. 13
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgm03009
]
CAL15_22460
Enzymes [BR:
bgm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CAL15_22460
Ribosome biogenesis [BR:
bgm03009
]
Prokaryotic type
ribosomal protein modification factors
CAL15_22460
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ARP96883
UniProt:
A0A1W6ZHI9
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All DBs
Position
4982935..4984263
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AA seq
442 aa
AA seq
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MATNRNPSLAIVSLGCPKALVDSERILTQLRTEGYEITPTYDNADVVLVNTCGFIDSAKA
ESLEAIGEAIAANGRVIVTGCMGVEESAIRQVHPNVLAVTGPQQYEEVVRAVHEAAPPRK
DHNPYVDLVPPQGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLNEAER
LVKAGVKELLVISQDTSAYGVDLKYRSGFWNGRPVKTRMTELCSALSELGVWTRLHYVYP
YPHVDEVIPLMAEGKVLPYLDIPFQHASPRVLKAMKRPAFEDKTLARIHRWRETCPDLTL
RSTFIVGFPGETEQDFQYLLDWMSEAQLDRVGCFQYSPVEGAPANALADPVPDEIKQERW
ERFMEHQQAISAARLRTKVGREIDVLIDGTDDDGDIVGRSSADAPEIDGRVYVDSERPLA
AGDIVRVRVVDSDEYDLWGEAL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaccgaaatcccagtctagctatcgtgtccttgggctgtcccaaggcgctc
gtcgactccgagcgcatccttacccagttgcgcaccgagggctacgagatcacgcccacc
tacgacaatgccgacgtcgtgctggtgaacacctgcggcttcatcgacagcgccaaggcc
gagtcgctcgaggccatcggagaagccatcgcggccaatggccgcgtcatcgtcacgggc
tgcatgggcgtcgaggaatcggccatccgccaggtgcatcccaacgtgctggccgtcacc
ggcccgcagcagtacgaagaggtggtgcgcgccgtgcacgaggccgcaccgccccgcaag
gaccacaatccctacgtcgacctggtgccgccgcaaggcatcaagctcacgccgcgccac
tacgcctacctgaagatctccgagggctgcaatcaccgctgcagcttctgcatcatcccg
tcgatgcgcggcgacctggtcagccgcccggtgggcgacgtgctgaacgaagccgagcgg
ttggtgaaggccggcgtgaaagagctgctggtcatctcacaggacaccagcgcctacggc
gtcgacctgaagtaccgcagcggcttctggaacggccggcccgtcaagacccgcatgacc
gagctctgttcggcgctgtccgaactgggcgtgtggacccggctgcactacgtgtacccc
tatccgcacgtggacgaagtcatcccgctgatggccgaaggcaaggtcctgccctacctc
gacatcccgttccagcacgccagcccgcgcgtactgaaggcgatgaagcggcctgcattc
gaagacaagaccctggcgcgcatccatcgctggcgcgagacctgtcccgacctcacgctg
cgctccaccttcatcgtgggcttccccggcgagaccgagcaggacttccagtacctgctg
gactggatgagcgaggcgcagctcgaccgtgtcggctgtttccagtattcgccggtggaa
ggcgcgccggccaacgcgctggccgaccccgtgcccgacgagatcaagcaggaacgctgg
gaacgcttcatggaacaccagcaggccatctccgcggcacggctgcgcaccaaggtgggc
cgcgagatcgacgtgctgatcgacggcaccgacgatgacggcgacatcgtgggccgctcc
agcgccgatgcccccgagatcgacggacgcgtgtacgtggacagcgagcggccgctcgcg
gcaggcgacatcgtgcgcgtgcgggtggtcgattccgacgaatacgatctgtggggtgaa
gccctgtga
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