Bythopirellula goksoeyrii: Pr1d_52550
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Entry
Pr1d_52550 CDS
T09914
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
bgok
Bythopirellula goksoeyrii
Pathway
bgok00071
Fatty acid degradation
bgok00280
Valine, leucine and isoleucine degradation
bgok00310
Lysine degradation
bgok00362
Benzoate degradation
bgok00380
Tryptophan metabolism
bgok00410
beta-Alanine metabolism
bgok00640
Propanoate metabolism
bgok00650
Butanoate metabolism
bgok00907
Pinene, camphor and geraniol degradation
bgok00930
Caprolactam degradation
bgok01100
Metabolic pathways
bgok01110
Biosynthesis of secondary metabolites
bgok01120
Microbial metabolism in diverse environments
bgok01200
Carbon metabolism
bgok01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
bgok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Pr1d_52550 (fadB)
00650 Butanoate metabolism
Pr1d_52550 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
Pr1d_52550 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Pr1d_52550 (fadB)
00310 Lysine degradation
Pr1d_52550 (fadB)
00380 Tryptophan metabolism
Pr1d_52550 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Pr1d_52550 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Pr1d_52550 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pr1d_52550 (fadB)
00930 Caprolactam degradation
Pr1d_52550 (fadB)
Enzymes [BR:
bgok01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Pr1d_52550 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Pr1d_52550 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Pr1d_52550 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Pr1d_52550 (fadB)
BRITE hierarchy
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QEG37907
LinkDB
All DBs
Position
complement(6297733..6299871)
Genome browser
AA seq
712 aa
AA seq
DB search
MSDPSILALDYPADDVAVITINDPTKKVNILSRAVLAELAGLLDELESRSGVAGLIFQST
KPGNFIAGANLEEFVASIDKPKEEIVELSREGHQLFGRLSQCSFVTVAAIGGLCIGGGAE
LAAWCDRRIMANDDKAKFGFPEVKLGLFPGWGGTARTPRIVGLSNALELVTGGENIDTAA
AEAMGLAIAAPADRLLEEAIALVRSEHETKEYLADRERWSGPISISDTELAFLGASASAF
IQGKTKGHYPAPMAALEVMLNAAGVDLETACQMEAEGFAELFGSPENRALLNVFFLQDHN
KKVSGPPDSEAREIQTAAVVGAGVMGQGIAAANVKRRIPVTLGDTSAEAIARGVQGVITE
VSYNKETKKPDAQRALDFLPLLNGTENDAEVAQADIVIEAIYENAEAKRALYAKLEPQLG
EQAILCSNTSTIPITELAHGLEHPERFCGLHFFNPVRQMPLVEVIRGKQTSGDTIATAVA
YAKVIGKSPIVVQDGPGFLVNRVLLPYMNEALLLLESGASIKAVDKAAKSFGMPMGPIEL
YDTVGLDIALHAGKVMHEAFPDRVVPSKILPAMVEAGRIGKKADKGFFDYMTDSKGRTKS
QPSPEAAAIIEKVSAGECADDLTDRLFLPMLLEATRVVEDGIVTDVRDVDLGLIYGIGFP
PFKGGLFFWADTLGAAAIVEKLESFQPLGERYAPTKMLLEHADKGKAFYPKL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccatcaattctcgcgctcgactatcctgccgatgatgtggcagtgatcacg
atcaatgatcctactaagaaagtgaatatcttgtcgcgagcggtgttggccgagttggca
ggactgcttgatgaattggaatcgcgctcgggcgtcgcgggattgatatttcaatcaacc
aagccaggcaacttcatcgcgggagccaatctggaagaattcgttgcgagcatcgacaaa
ccaaaagaagaaatcgtcgagctttctcgtgaggggcaccagctgtttggacgtttgtcg
caatgttcattcgtcaccgttgccgcgattggcggactctgcattgggggtggggcggaa
ctggctgcgtggtgcgatcgacgcatcatggccaatgacgacaaagcgaaattcggtttt
cccgaagtgaaactgggactgttccctggctggggcggaacggcccgaacgcctcggatt
gtgggactctctaatgccctggagttggtcaccggtggcgagaatatcgacacggccgca
gccgaagcgatggggctagccatcgcagcaccggccgatcgtttgttggaagaggccatc
gcgctggtgcgaagcgaacacgagacgaaagagtaccttgccgatcgtgagcgctggtct
ggtccgatctcgatcagcgacacggagctagcgtttctcggtgccagtgcgagcgcgttt
atccaggggaagaccaagggtcattatccggcccccatggcagcgctggaggtcatgctc
aatgcggcaggagttgatctggaaaccgcttgccagatggaggccgaggggttcgcggaa
ttgtttggttcgccagagaatcgggcacttctgaacgtgtttttcttgcaagatcacaat
aaaaaggtcagcgggccgccggactcggaagcccgcgagattcaaaccgccgccgtggtt
ggagctggtgtgatggggcaggggattgccgccgccaacgtcaaacgccgcattccggtc
accttgggcgacacgtccgccgaggccatcgcccgcggggtgcagggcgtcattaccgag
gtgagttacaacaaggaaacgaaaaagcccgatgcgcagcgagcgctggattttctcccc
ttgttgaacggcaccgagaacgacgccgaggtcgcccaggccgatatcgtgatcgaagca
atctacgagaacgccgaagcaaaacgtgcactgtatgccaagctagaaccacagctcggc
gagcaagcgattctctgttccaacacttccacgatccccatcacagagctagcccacggc
ctggagcatcctgaacgattctgcggcttacatttcttcaatcccgtgaggcaaatgccg
ctggtcgaagtgatacgtggcaagcaaacctcgggcgacacgattgccaccgcggtggcc
tacgccaaggtcatcggcaagtcgccgattgttgtccaagatgggcccggtttcttggtg
aatcgtgtgttgctgccgtacatgaacgaagcgttgttgctgctggagtcgggtgcctcg
atcaaggcagtcgacaaagcagctaaatcgttcggcatgccgatggggccgatcgagttg
tacgacaccgtgggtctcgacatcgccctgcatgccggcaaagtgatgcatgaggcgttt
cccgatcgcgtggtcccttcaaagatcttgcccgcgatggtcgaagcgggccggatcggc
aaaaaggctgacaagggtttcttcgactacatgaccgacagcaagggacgcaccaagtcg
caacccagccccgaggcggctgcaatcatcgagaaggtttccgcaggtgaatgcgcggac
gatctcacagatcgcctgttcctgccgatgctgcttgaagcaacgcgggtggtcgaggat
ggtatcgtgacggatgtgcgggacgtggatttggggctcatctatggcatcgggtttccc
ccgtttaagggggggctgtttttctgggccgacacgctgggcgctgcggcgattgtagag
aagctcgagagctttcagccgttgggtgagcggtatgctccgaccaagatgctgctggag
catgcagacaaggggaaagcgttctatcccaagctttaa
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