Burkholderia glumae LMG 2196 = ATCC 33617: KS03_1819
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Entry
KS03_1819 CDS
T03820
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu00540
Lipopolysaccharide biosynthesis
bgu01100
Metabolic pathways
bgu01250
Biosynthesis of nucleotide sugars
Module
bgu_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KS03_1819 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bgu01005
]
KS03_1819 (rfaD)
Enzymes [BR:
bgu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KS03_1819 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bgu01005
]
Core region
KS03_1819 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
AJY65933
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Position
I:1985055..1986047
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AA seq
330 aa
AA seq
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MTLIVTGAAGFIGANLVKALNERGETRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVER
FARGDFGKVRAVFHEGACSDTMETDGRYMMDNNFRYSRAVLDTCLANGTQFLYASSAAIY
GGSTRFVEDREVEAPLNVYGYSKFLFDQVIRRVLPQAQSQIAGFRYFNVYGPRETHKGRM
ASVAFHNFNQFRAEGKVKLFGEYNGYGAGQQTRDFVSVEDVVKVNLFFFDHPEKSGIFNL
GTGRAQPFNDIATSVVNTLRALDGEPPLTLDEQVRQGLIEYVPFPDALRGKYQCFTQADS
SRLRAAGYDAPFLTVQEGVDRYVRWLFGQL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatcgtcaccggcgcggccggcttcatcggcgcgaatctcgtgaaggcgctc
aacgagcgaggcgagacccgcatcatcgcggtcgacaacctgacccgcgcggacaagttc
aagaacctcgtcgattgcgagatcgacgactatctcgacaagaccgagttcgtcgagcgc
ttcgcgcgcggcgatttcggcaaggtgcgtgccgtgttccacgagggcgcctgttcggac
acgatggaaaccgacggccgctacatgatggacaacaacttccgctacagccgcgcggtg
ctcgacacctgtctcgcgaacggcacgcagttcctctacgcctcgtcggcggcgatctac
ggcggctcgacgcgctttgtcgaggatcgcgaggtggaagcgccgctcaacgtctacggt
tattcgaagttcctgttcgaccaggtgatccgccgcgtgctgccgcaggcgcaaagccag
atcgcgggctttcgctacttcaacgtctacggcccgcgcgagacgcacaagggccgtatg
gcgtcggtggcgttccacaacttcaaccagttccgcgccgagggcaaggtcaagctgttc
ggcgagtacaacggctatggcgccggccagcagacgcgcgacttcgtgtcggtcgaggat
gtggtgaaggtcaacctgttcttcttcgaccatcccgaaaaatccggcatcttcaacctc
ggcaccggccgcgcccagcccttcaacgacatcgcgacctcggtcgtcaacacgctgcgc
gcgctcgacggcgagccgccgctcacgctcgacgagcaggtccggcaggggctcatcgag
tacgtgccgtttcccgacgcgctgcgcggcaaatatcagtgctttacacaggccgactcg
tccaggctgcgcgcggccggctacgacgcgccgttcctgaccgttcaggagggggtcgat
cgctacgtgcgttggctgttcggccagctgtga
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