Bacteroides heparinolyticus: C3V43_04485
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Entry
C3V43_04485 CDS
T05405
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bhf
Bacteroides heparinolyticus
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhf03009
]
C3V43_04485 (rimO)
Enzymes [BR:
bhf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C3V43_04485 (rimO)
Ribosome biogenesis [BR:
bhf03009
]
Prokaryotic type
ribosomal protein modification factors
C3V43_04485 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AVM57088
LinkDB
All DBs
Position
complement(1077001..1078299)
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AA seq
432 aa
AA seq
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MRRKTVDIITLGCSKNLVDSEHLMRQLEDVGFAVTHDAEAPKGQIAVINTCGFIGDAKQE
SIDMILEFAQAKEEGDLEKLYVMGCLSERYLKELAVEIPQVDKFYGKFNWKELLHDLGKT
YREELHIERTLTTPKHFAYLKISEGCDRKCSYCAIPIITGRHVSRPMEEILDEVKYLVAR
GVKEFQVIAQELTYYGVDLYKKQMLPELIEQIATVPGVEWVRLHYAYPAHFPTELFRVMR
EHDNVCKYMDIALQHISDNMLQRMCRHVTKAETYGLIERFRKEVPGIHLRTTLMVGHPGE
TEADFEELKDFVREIRFDRMGAFTYSEEEGTHAATQYEDTIPQEMKQARLDELMSIQQTI
SGELSAAKVGRKMKVIIDRLEGDYYIGRTEFDSPEVDPEVLIERGESKLNIGNFYQVEIV
NSDDFDLYGRII
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaaaacagttgatatcataacattagggtgttctaaaaatctggtggattca
gagcatctgatgcgccagttggaagatgtaggatttgctgtgacgcatgatgccgaagct
cccaaagggcaaatagccgtaataaatacctgcggttttataggagatgcgaagcaagaa
tccattgatatgattctggagtttgcacaagccaaggaagaaggtgatttggagaagctt
tacgtgatggggtgtctttcggagcgttaccttaaagagctggctgtagaaatacctcag
gtcgataaattttacggaaagttcaattggaaggaactgctgcatgatttgggaaagacc
tatcgcgaagaattgcatatagagcgtacgttgacaacccccaaacattttgcttacctg
aaaatatccgaaggctgcgaccggaagtgttcttattgtgccattcccatcattacgggg
cgacatgtatcccgtccaatggaggaaatcttggatgaggtgaaatacttggtagcacgt
ggcgttaaagaatttcaggttattgcacaagaactgacttattatggtgtggatttgtat
aaaaagcaaatgttgcccgagttgattgagcaaatagcaaccgttcccggtgtggaatgg
gtacgtcttcattatgcctatcctgcgcacttccctacagaactttttcgtgtgatgcgt
gagcatgacaatgtgtgtaaatatatggatatagccttgcagcatatcagtgacaatatg
ttgcagagaatgtgtcggcatgtaacgaaggccgaaacttatgggctgatagaacggttc
cgcaaggaggtacccggcattcatcttcgcacaacgctcatggtggggcatccgggagaa
acggaagccgattttgaagagttgaaagattttgtccgtgagatacgtttcgacaggatg
ggcgcttttacttattctgaagaggaaggtactcatgctgccacacaatatgaagataca
attccgcaagagatgaaacaagcacgtctggacgaactgatgtctattcagcagactatt
tcaggagagttgagtgctgcgaaggtaggtcggaagatgaaggttatcattgaccgctta
gaaggtgactattatatcggccgcacagagttcgattctccggaagtagatccggaggtg
ctgatagagcgtggagaatcgaagttgaatattggtaacttttaccaagtggagatcgta
aattccgatgatttcgacctttatggacgaataatctaa
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