KEGG   Benincasa hispida (wax gourd): 120071768
Entry
120071768         CDS       T07258                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03020  RNA polymerase
bhj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120071768
  09124 Replication and repair
   03420 Nucleotide excision repair
    120071768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhj03021]
    120071768
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120071768
Transcription machinery [BR:bhj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120071768
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120071768
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD
Other DBs
NCBI-GeneID: 120071768
NCBI-ProteinID: XP_038880081
LinkDB
Position
1:20311111..20313659
AA seq 114 aa
MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ
DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaagttttgccgggaatgtaacaacattctctatccgaaggaggataga
gatgagaagattcttctctatgcgtgtcgcaactgtgatcaccaagaagtcgctgacaat
aactgcgtctataggaatgagattcaccatgctgtaggggaacgcactcaagttctccaa
gatgttgcagctgatccaactctccctcggactaaagctgtccgatgtgctcaatgcaac
catggagaagctgttttcttccaggccactgccagaggggaggaaggtatgacattgttc
ttcgtttgctgcaatccaaattgcggtcacagatggagagattga

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