Benincasa hispida (wax gourd): 120077147
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Entry
120077147 CDS
T07258
Name
(RefSeq) exopolygalacturonase isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Module
bhj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120077147
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
120077147
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
120077147
NCBI-ProteinID:
XP_038886976
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Position
5:52337907..52342016
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AA seq
417 aa
AA seq
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MNFPFHTTLFLLLSSSCFSSVLSGENLEADVSESLLRYRTKSSHVFSVRSFGARANGLTD
DSNAFLAAWRMACGSAGLVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKGYLKASTDLS
KYGSGAGWIEFRWMEGLTLTGGGTFDGQGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTV
VQHITSLDSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSYNVHLSQSRIQTGD
DCISIGQGNSQVTVSSINCGPGHGISVGSLGRYRNEGDVNGLVVKNCSLTGTTNGIRIKT
WPNSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFRSCSLKAPSLVKLSDIYFKNIRGT
SSSKVAVALECSKGIPCQNVNLENVHLNLSSGENHPSSTCKYVRARYIGTQVPPPCA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcccctttcacaccacattgtttttgttgctctcatcttcctgttttagctca
gttcttagtggagaaaatttggaagcagacgtttcagaaagcttattgcgttacagaact
aagagttctcatgttttcagtgttagaagctttggtgctcgagcaaatggcttgactgat
gatagcaatgccttcctagcagcatggaggatggcctgtggttcagctggactggtaact
ttccttattccaaaaggaacctatttggttggtccagttaaattttcaggcccttgcaaa
aatgtgtcatctctaacagttaaaatgaagggctatttgaaggcatcaacagacctgtcg
aaatatggttctggtgcaggttggattgagttcagatggatggaggggctaaccttgact
ggaggtggaacctttgatggccaaggcgctgaggcatggccattcaacaactgccttgat
gactacaattgcaaactacttccaactaacttgaaatttgtggctatgaataacacggtt
gttcaacacataacttcactggatagcaagttctttcacctggctttagtacaatgcaag
aggttcagaggtagcaaactcatgatttcagctccggcaaatagtcccaacactgatggc
atccacattgaccgaagttataacgtccatctttctcaatcacgtattcaaactggtgac
gactgcatctccatcggacaagggaattctcaagtcacagtctccagcatcaactgtgga
cctggccatgggatcagcgtcggaagcttgggaagatatcgaaatgaaggagatgtaaac
ggattagtagttaaaaattgcagcctcacaggtaccaccaatgggatcagaatcaagaca
tggccaaactctcctggcagcagctcagccacaaacatgacatttgagaacattaccatg
aacaacgtgtccaatccaattatcattgatcaatcatactgtccgttcagatcttgttct
cttaaggcaccatctctagtgaagctgagtgatatttatttcaagaacataagaggaacc
tcttcctctaaggtagctgtggcattagaatgcagcaagggaatcccatgtcagaatgtg
aaccttgaaaatgttcacttgaatctttcatcaggggaaaaccacccatcttctacttgc
aaatatgttagagccaggtacattggcacccaagtcccacccccttgtgcttaa
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