Benincasa hispida (wax gourd): 120080602
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Entry
120080602 CDS
T07258
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03020
RNA polymerase
bhj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120080602
09124 Replication and repair
03420 Nucleotide excision repair
120080602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120080602
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120080602
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120080602
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120080602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
120080602
NCBI-ProteinID:
XP_038891253
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All DBs
Position
6:25227333..25230209
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AA seq
320 aa
AA seq
DB search
MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHNDQTLDV
TSKDLYSSDHTVVPVDFSDSAAATGEALDSKGIIIVKLRRGQELRLRAIARKGIGKDHAK
WSPAATVTFMYEPSIHINEDLMDTLTPEEKRTWVESCPTRVFEFDSVTHQVTVVDPEAYT
YDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
DDTVEADDQFGELGAHMRGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagttcctaccagcggtttccaaaggtaaaaatccgagaactccgagatgat
tacgccaaattcgagctccgtgacacggacgccagcatggccaacgccctccgccgcgtc
atgatcgccgaggtgcccaccatcgccattgacctggttgaaattgaagtgaactcctct
gttcttaatgacgagttcatcgcccatcgcctcggtcttattcctctcaccagcgagcgt
gccatgtccatgcgcttctctcgcgactgcgatgcttgcgatggtgatggccaatgcgag
ttttgctctgtcgagtttcaccttcgcgccaagtgccacaacgaccaaaccctagacgtc
accagcaaggatctctatagttctgatcacactgttgtccccgttgatttctctgattct
gctgcagctactggtgaagcgctggattccaaaggaataatcattgtgaagctacgtcgt
ggtcaagagttgcggctgcgagccatagctaggaaggggattggtaaagatcatgcaaaa
tggtcgcctgcagcaactgtgacattcatgtatgagccgagcattcatatcaatgaggac
ctaatggacacattaactccagaggaaaagagaacttgggttgaaagttgcccaaccaga
gtatttgaatttgattctgttactcatcaggttacggtggttgatcctgaggcatacact
tacgatgatgaggtgattaagaaagcagaagctatgggtaaagctggactagtggatatt
actgcaaaagaagatagttttatcttcacagttgaatctactggtgcaatcaaagcttcc
cagttgatactcaatgccatagatatcctgaaacagaagctggatgcagtccgcctttca
gatgatactgtagaagcagatgatcagtttggtgagttaggtgcacatatgcgaggtgga
tga
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