Benincasa hispida (wax gourd): 120082950
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Entry
120082950 CDS
T07258
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120082950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120082950
Enzymes [BR:
bhj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120082950
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
120082950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
120082950
NCBI-ProteinID:
XP_038894318
LinkDB
All DBs
Position
8:complement(12719132..12765686)
Genome browser
AA seq
1401 aa
AA seq
DB search
MNRAQAEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPID
GGLLDPRMGPANKGCKCTTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKSC
SRILLEEKLYKDFLRKIRNPKLEPLRKSDLVKKIIKKCSTLTTGNKSTKCSRCGYLNGSV
KKAVSMLGILHYRSRSKDAGVVSEDLRAPYNVSNDILNPFRVLSLFKRMSDEDCELLFLS
DRPEKLIVTNVPVPPIAIRPSVIMDGSQSNENDITERLKRIIQQNASVSQELSTSNSQPK
CLESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTG
RTVISPDPNLKITEVAVPIHMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMVRHLD
GSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTL
RFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFL
TSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHA
SMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGL
YSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLIKQKQTTILEGYRD
CDKQINLFNTGNLPPEAGCDAAQSLEAKITQILNGIREATANVCMQNLHWRNSPLIMSQC
GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLT
ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYG
DDGMDPAQMEGKSGAPLNFERLFLKAKATCPTDGNKILSPSEFSKTVEDRLSKHDATPEC
GCSPAFIGSLKTFLNKYVEAQKKSWSMTLLADNELDIGKRIIGSSDNDNIMIRNKVVQNI
AGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV
TLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSS
RSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDTDR
SKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEG
VDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEV
LGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGML
KVRQRVSLPQQLHYGPPAILA
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagcacaagcggaaggtctggtgtttactaaacaaccatacattgaggatgtt
gggcctcgtaaaatcaagagcatgcagttcactaccttctccggatctgaaattagcaaa
atggctgaagttcaggtgtacaaaggtttatattatgatactactcgaaaacctatcgat
ggcggcttgttggatcctcgaatggggcctgctaataagggctgtaaatgtactacatgc
catgccaattttggtgactgcccaggacattatggatacttgagtctcgctctccctgtt
tttaatgttggttactttactacaatattggaaatactaaagtgcatttgcaagtcatgt
tctcgtatacttttggaagagaagctttataaagatttcttgaggaagataagaaatcct
aaattggaacccctgcggaagtctgatcttgtgaaaaaaatcataaagaagtgttctacc
ttgacaactggcaataaaagcacgaagtgctccagatgtggatatttaaatggttcggtg
aagaaggctgtatctatgttgggtatactgcattatcgttcaagatccaaggatgctggg
gtggtgtcggaggatcttagggcaccctataatgtgtctaatgatattctgaaccctttt
agagttctttctctttttaaaaggatgtcagatgaggactgtgagttactttttctatcc
gatagacccgagaaactcattgttactaatgttccagtgcctcctatagccatccgtcct
tctgtaattatggatggttctcaaagcaatgaaaatgatataactgagaggttaaaacga
attattcaacagaatgctagtgttagccaagagttatcaacatcaaactcacaacctaaa
tgcctggaatcttgggatatgcttcaaagtgaagttgcacaactaataaatagtgatgtc
cgtggtataccatttacaatgcaagttagcaaaccgttggccggttttgttcaacgtctt
aaaggaaagcaaggacgttttagaggaaatttgtgtggaaagcgtgttgagtttacaggc
agaactgtcatatcacctgatcctaatctgaaaattacagaggttgcagttcccatacac
atggctcgaattttaacttatcctgaacgtgttaccagtcacaatatagaaaagttgaga
caatgtgtcagcaatggtcccgataaatatcccggtgcaaggatggttaggcatctcgat
ggttctatgaggtcattgatgatttcaggtagaaagcgccttgctgatgaattgaaatat
ggtgaaatagttgaacgccatcttgaagatggagatgttgttcttttcaacagacagcct
agtctacatcgaatgtctatcatgtgtcatagggtgagagttatgccttggagaacgttg
agattcaatgaatctgtttgcaatccctataatgctgattttgatggtgatgagatgaat
atgcatgttccacaaacagaggaggctcggacagaggcaattctgttgatgggggtgcaa
aataatctatgcactcccaaaaatggggagattttagttgcttcaactcaagattttttg
acatcatcttttctcataacaagaaaagacacattttatgaccgtgcagcattttctctt
atgtgttcttacatgggagatggcatggacttggttgacttgcctacacctgctctagtc
aaacctatcgagctttggactggcaaacaattatttagtgtcttggttcgcccacatgca
agtatgaaggtctatcttaatcttacagttaaggagaaaagctacagtaaagttaaagga
aatgaaaaagaacgagaaactatgtgccctaatgatggatttgtctacttccgtaatagt
gagctaatatcaggccaagttgggaaggctactttaggcaatggcaacaaggatggactt
tattctgttctacttagagactacaaggcgcatgctgctgctgtttgcatgaatcgtctt
gctaagctgagtgctcggtggataggtaaccatggtttctctattggaatcgatgatgtc
caaccgggagatcaattgattaaacaaaaacaaactactattttggagggttaccgtgac
tgtgataagcagatcaacttattcaacacaggaaatttacctcctgaagctggttgtgat
gctgctcaaagtttggaggctaagataactcaaattttaaatggtattcgggaagccact
gcaaatgtgtgtatgcaaaacctacattggagaaatagtccgttgattatgtcacaatgt
ggttccaaaggatctcctattaacatcagccagatgattgcttgcgttggtcagcagtca
gttgggggccgccgtgcgccagatggattcattgatcggagccttccccattttcgtagg
aaagcaaaaactccggccgccaaaggctttgttgcaaattccttctacagtggcttgaca
gctaccgagtttttctttcatacgatgggaggacgagaaggccttgtggatacagcggtg
aaaacagccgacactggttatatgtctcgtagattgatcaaggcactggaggacttatca
attcattatgacagctctgtacggaatgctggtggatgtatagttcaattttgttatgga
gatgatggaatggatccagcacaaatggaaggaaaaagtggagcacctttgaattttgag
cggctgtttctgaaagccaaggctacatgtccaactgatggtaacaaaatcctgtctcca
tcagaattttccaagacggtagaagacaggctctcaaaacatgatgctactcctgagtgt
ggttgctctccagcatttatcggttctcttaagactttcctgaacaaatacgttgaggca
caaaaaaaatcatggagcatgacactgttggcagataatgaattagatataggcaaaagg
atcattggtagttctgacaatgacaatattatgattcggaataaggtagtccagaacata
gctggtgtcacacacagacaacttcaggttttcttggacacgtgcttgtcccgctaccat
accaaaaaaatagaagctggaactgccattggtgccattggagctcaaagtattggagaa
cctgggacacaaatgacattaaaaacatttcattttgcaggagttgctagcatgaacgtt
acacttggtgttccacgtatcaaagaaattataaatggagccaaaaggatcagcactcca
attgtcactgcagcacttacgcatgatgataatgtcaatattgcccggatggtaaaagct
cgaattgagaaaacaaatctaggacagattgcaaaatgcatacaaattgtaatgagttcc
agatcagctttaatagaaatcaaacttgacatggaaaaaatcagagatgcagaactatac
gtagatgccaatgttgtcaaacaagcaattctcgttactccaaaactcaaactgaagcat
gagcatattaatgttttggatgatagaaagttgcgagttcttcctcaagacacagatagg
agtaaactacattttaatctacactttcttaaaaacatgcttcctggagttgttgtaaag
ggtataaaaactgtagggcgtgccgtcatcaaagaggaaaaagataaagcaaggaacgcc
aaaaagttcagtttgttggttgaaggaacgggacttcaagctgttatgggcactgaggga
gttgatgggtgtaacacaaagagtaatcacatcattgaagtgcaacaagtacttggcatt
gaagctgcaaggaaatgtattattgaagagatcaaatataccatggaaagtcatggaatg
agcatagacatacgtcatatgatgcttttaggagatttgatgacattcaggggtgaagtt
cttggaatcacaagatttggcattcaaaaaatggataaaagtgtactgatgcttgcttca
tttgagaaaaccgcggatcatctttttaatgcttctgtgaatggaagggatgacaaaatt
gaaggagttagtgaatgcgtaatcatgggtataccaatgccgctaggcactggcatgtta
aaagtcagacaaagagtttctttgccacaacaattgcattatggaccacctgcaattcta
gcttga
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