Benincasa hispida (wax gourd): 120092142
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Entry
120092142 CDS
T07258
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120092142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120092142
Enzymes [BR:
bhj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120092142
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120092142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF1699
Motif
Other DBs
NCBI-GeneID:
120092142
NCBI-ProteinID:
XP_038906281
LinkDB
All DBs
Position
11:complement(72093843..72125999)
Genome browser
AA seq
1702 aa
AA seq
DB search
MAQTTEGASESVKMVAFSFMTNEEVRKHSAVKITAPILLDGMGRPVSGGLYDPAMGSLDE
TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQCTCFSCHHFRAGANQVEKC
KTLLELILNGQVVEAKQLKQSEDQTEDSELLTESSHSMYTDERKNMKPKTWTSLQFSEAI
SVVNKFLKHKQKECKNCGAKNPKITKPTFGWLHMSRLAGAHKRANAIRGCKPVSVSSGTE
GISSLEEETTISHPTVINILEGDAFDDTATKAPIEDSEEVPPEIFMQKNFSSGQLMPSEV
KDIMKRLWKNEATLCSFISDIRQQGHGNRAGYSMFFLESVLVPPIKFRPPAKGGDSVMEH
PQTVLLNKVLQSNISLGNAHANKSEHSKIVRLWMDLQQSINILFDSKTAAGPGKKDASLG
ICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWN
VQKLRNAIINGPEIHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDD
YEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFD
GDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLNF
DEFSQLLYSSGITTSRACGSSEKPGQKIFTLDFEAEMLPVLPAVWKPEPLWTGKQVVTAL
LNHITRGSPPFCVEKDVKIPRGFFKCRDIGNNSSKGKMVDGEKSKRKRTMNGNKLGKGEV
LDEEDSKKKEYLKVDKSKAARLEDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSN
TAGLLLSVMSRLFTVFLQTHGFTCGVDDLLLIEYMDKEREKQLQICEKIGEQVHLGFLKV
KDGEKLDPMTLQLNIEKTISNNGESALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPS
VKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGG
FIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRD
ADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYQKSHHQLGKYNLFINELPSSLQE
KAEFIYNSLSKDKVPGLVPKEDFVRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLN
TFHHAGRGEMNVTLGIPRLQEILMTASQEIKTPIMTCPLREGYSMDVAKCLANKLKKITV
ADIIESMNATVVPFSQRKRERCSIYKLRINFYPLENNPQHAHIPPEDLKDTLENVFVRAL
EDLIENEMHLLSKINGIRNFVSDSQSKGSSERDEFSSSQQEENDDDDDLGNDLDVAEDLG
SDMKKQKLQATDEMDYEDDSEDELDAKEPSTGFESEVDQGDEAEITNDDMMEIVKGGTSE
NQTEIVDVSKSKSKGKTTEAANKKKKVKEFTRFDYDRSIFVEAKGNHFEVHFKFTNEPHI
LLTQIAQRAAQKVSIQSSGKIIRCQQITCKEGPVIYHGNNVKERKNIKPEEKEKIPALQT
SGVDFMTLWELQDELDVRYIYSNDIHAMLQTYGVEAARETIIREIQNIFTSYGISVNMRH
LTLVADYMTHSGGYRPMSRLGGIADSISPFSRMTFETASKFIVQAAFHGEVDTLETPSAR
ICLGLPAKMGTGSFDLMQKIEV
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccacagagggcgcgtctgagtcggtcaagatggtagccttcagcttcatg
actaatgaggaggttcgtaaacatagtgctgtaaaaattactgcacctatattattagac
ggtatggggagacccgtatctggtggactctatgatcccgcaatgggctctttagacgag
acaacactttgcaaatcttgcggacagaggcctttctattgccctggtcattgtggtcac
attgacctcgtttcacctgtgtataatcccttgttatttattattctccataatcttctt
caatgtacttgtttctcttgccaccattttcgagctggtgcaaatcaggttgaaaaatgt
aaaactctactggagcttattttgaacggtcaagttgttgaggctaaacagttgaaacag
tcggaggaccagacggaggattcggagttactaactgagtcttcacattcaatgtatacc
gatgaaaggaagaacatgaaaccgaaaacatggacttctcttcaattttctgaagccata
tcagttgtgaataaatttttgaagcacaaacagaaagaatgcaaaaattgtggagccaaa
aatcctaagattactaaaccaacttttggttggcttcacatgagtcgcttggctggagcc
cataaaagggccaatgccattagaggttgcaagcctgtgagtgtaagtagtggaactgaa
ggaatatcctcgcttgaggaagagactacaatttcgcaccccactgttatcaatatattg
gaaggagatgcatttgatgacactgcaaccaaggcccctatagaagattctgaggaagtt
cccccggaaattttcatgcaaaagaatttctcctcaggacagttgatgccatctgaggtt
aaagatatcatgaagcgtttgtggaaaaatgaagctactctttgttcctttattagtgat
attcgtcagcagggacatggaaatagggcaggctattccatgtttttcttagagtctgtt
ctagtccctccaattaagttccgcccccctgcaaaaggaggtgattctgtaatggagcat
cctcaaacagtgttactgaacaaggtgctacagtccaatatatcattaggaaatgctcat
gctaacaaatcggaacactcaaagatagtgaggctatggatggatcttcaacaatctatc
aatattttgtttgatagcaaaactgcagctggtccaggcaaaaaagatgcttctttggga
atatgtcagttattggagaagaaggaaggcatgtttcgtcagaagatgatgggaaagagg
gttaactttgcatgccgatctgtcatttcaccagatccatacttagcagttaatgaaatt
ggaatccccccttattttgcattgagattaacctatccagagagagtgactgcttggaat
gttcagaagttacgaaatgctataatcaatggtcctgaaatccatccaggtgccacacat
tacatagataagttagctacagtaaaattgaacttaaaaccaagtcggaaatcacgcatt
tctatctcgaggaaattgccatcttctcgtggtgtggttgtggatcaaggaagcgatgat
tatgaatttgaagggaaaattgtgaatcgccatctgcaagatggagatattgttctcgtg
aatcgacagcctacacttcataaacctagtataatggctcatgttgtccgtgtcttgaag
ggcgagaaaacaattcgcatgcattatgcaaattgcagtacgtataatgctgattttgat
ggtgatgaaatgaacgttcattttcctcaagatgaaatttctcgtgctgaagcttataat
attgtgaatgcgaataaccagtatgtcaaacccactagcggtgaacccatcagagcctta
attcaggaccacattataagtgctgtacttctcacgaagaaggatacttttttaaatttt
gatgagtttagccagcttctctatagttctggcattacaacatcaagagcatgtggttct
tcagagaaacctgggcagaagattttcactttagattttgaagctgaaatgctacctgtt
cttcctgcagtatggaaaccagagcctctttggacaggaaaacaggttgtcacagcctta
ttgaatcatatcactagaggctccccaccattttgtgtggaaaaagatgtgaaaattcca
cgcggtttttttaagtgcagagatataggaaataattcttccaaaggtaaaatggtcgat
ggcgaaaaatcaaagagaaaaagaactatgaacggaaataagttgggaaaaggtgaagtt
cttgatgaagaggattcaaagaaaaaggagtacttaaaggttgataagtcgaaggcagca
cgtttggaggatgatagcttactaatatttaaaaatgaattggtgcgcggtgtcatagat
aaggctcaatttggtgattatggcttagtgcatacagtgcaggagctctatggttcaaac
accgctggcctgttgctttctgtgatgagtcgtttgttcactgtttttcttcagacacat
ggattcacatgtggagtagatgatcttttgctgatagaatatatggacaaggagagagag
aagcaactccaaatctgcgagaaaattggtgaacaggtgcatcttggatttcttaaggtc
aaggatggagaaaaattagacccaatgacactgcagctgaatattgagaaaactatttcc
aataatggagaatctgcactaacatcattggatagaaaaatgaccagccaacttaatgaa
aggactggaaactcaaaggtcctcaaggatttgctgtctgaaggtttgctaaaaccctca
gtgaagaactgcatttctctgatgacgacttctggggctaaaggtggtacggctaatttt
caacaaatatcttcacatttaggccagcaacagttagaaggcaaacgagttcccagaatg
gtctcaggaaagactttaccctgctttccaccttgggattgggcatcacgagctggaggg
ttcattgttgatcgctttcttactgggcttcgacctcaagaatattacttccattgcatg
gctggccgtgaagggttggttgatacagcagttaagacatctcggagtggatatctacaa
agatgcctaataaaaaatctggagtctctgaaaatttgttacgatcacactgtccgcgat
gctgatggctctgtgattcaattccaatatggcgaggacggtgtagatgtccataaaaca
gcctttattacaaaatttgaagcactagcagctaaccaagatatgctttaccaaaaaagt
catcatcaacttggcaagtataatctattcatcaatgagttgccttcatctcttcaagag
aaagcagagttcatatataattcactttctaaggataaggttcctggtctggtaccaaaa
gaagacttcgtcagactattggagaataagtacctatcaagtctggcacagcctggagaa
ccagttggcgtactggctgcacagtctattggagagccatcaacacagatgacgttaaac
acattccatcatgctgggcgtggtgagatgaatgtgacccttggaattcctcgccttcag
gagatcttgatgactgcttctcaagagattaagacacctataatgacatgcccattgaga
gagggctactcaatggatgttgcaaagtgtcttgctaataagctaaagaagattacagta
gctgacataatagagagcatgaatgcaactgttgtgccattttctcaaagaaagcgagag
agatgcagtatttacaagcttcgaattaacttttatccacttgaaaataatccacagcat
gctcatataccacctgaagatttgaaagacacattggaaaatgtatttgttagggcgttg
gaagatttgatcgaaaatgaaatgcacttgctatcaaagatcaatgggataagaaatttt
gtttccgattcacaatcaaagggttcaagtgaaagagatgaattcagcagttcacaacaa
gaagaaaatgatgatgatgatgatcttggtaatgacttagatgtcgctgaagatcttggt
tccgatatgaaaaaacaaaaacttcaagctaccgatgagatggattatgaagatgattca
gaagatgaacttgatgccaaagaaccatcaacaggatttgaaagtgaagttgatcaaggc
gatgaagctgaaataaccaatgatgatatgatggaaatcgtgaaaggcggtacatctgag
aatcagactgagatagtagatgtctcaaagtccaagtcgaaagggaagacaaccgaagca
gcgaacaaaaagaagaaagttaaagagttcaccagatttgactacgatagatcaattttt
gtggaagccaagggaaatcattttgaggttcattttaagtttacaaatgaacctcatatt
ttgctaacccagatcgctcagagagcggcccagaaggtgtctattcaaagctcgggcaaa
atcatccgatgtcaacaaattacgtgcaaggaaggtccggtaatataccatgggaacaat
gtcaaggaaagaaagaatatcaaaccagaagaaaaggaaaaaattcctgctctgcagacc
agtggggttgacttcatgacgctctgggagttgcaagatgagcttgatgttagatatata
tattccaatgacattcatgccatgcttcaaacatatggagtggaagctgctagggaaacc
ataataagagaaattcaaaacattttcacttcatatgggatatctgtcaatatgcgacat
ctaactctcgttgctgattatatgactcattctggtgggtaccgaccgatgagccgacta
ggaggcatagccgattcaatatctcctttcagtcgaatgacttttgagacggcttcaaag
ttcattgttcaagctgcattccatggggaggtagacaccttggaaactccatctgctagg
atctgtcttggtttgccagcaaagatgggtaccggcagctttgatttgatgcagaaaatt
gaagtctga
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integrated database retrieval system
