KEGG   Bordetella holmesii 44057: D558_2027
Entry
D558_2027         CDS       T03379                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
bhm  Bordetella holmesii 44057
Pathway
bhm00740  Riboflavin metabolism
bhm01100  Metabolic pathways
bhm01110  Biosynthesis of secondary metabolites
bhm01240  Biosynthesis of cofactors
bhm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    D558_2027 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D558_2027 (ribD)
Enzymes [BR:bhm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     D558_2027 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     D558_2027 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Attacin_N
Other DBs
NCBI-ProteinID: AIT26697
LinkDB
Position
1915015..1916130
AA seq 371 aa
MRRALELARGVIYTTSPNPRVGCVIVRDGQVLGEGATQPAGGPHAEVMALRAAQAGGHDL
AGATVFVTLEPCSHYGRTPPCVDALVAAAPARVVVALGDPNPRVAGQGFARLRAAGIAVT
SGICEQEALALNAGFVARMSRATPWLWLKLAASLDGRSALHNGVSQWITGEAARADGHAW
RARADVVLTGMGTVLKDDPQLTVRAVQTPRQPRKAVVDGRFQVPEHARLFDGTPAWVFTA
IRDDAKAARLADKNVEVVCLPDAGGQRVDLAAMMRWLAAQDCNEVHVEAGAGLSGALLAA
DCVDELLVYLAPVMLSDAAGMVQMPMLEHLDAARRFRFTDLVRVGEDVRLQARDHARWLA
LLASARRASEQ
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgcgccgcgccctggagcttgcccggggcgtgatctacaccacgtcgcccaacccacgc
gtgggctgcgtcatcgttcgcgacggacaggtattgggcgagggggcgacgcagcctgcg
ggcggaccgcatgccgaggtcatggcgctgcgtgcggcgcaagccggagggcatgacctg
gccggcgccacggtctttgtcacgttagagccctgcagccactacggccggaccccgcct
tgcgtcgacgccttggtggcggccgctccggcgcgggtggtggtggcgctgggcgacccc
aatccgcgtgtggcgggccagggcttcgcacgcctgcgcgcggcaggcatcgcggtcacc
tcgggcatctgcgagcaggaggcattggccctgaatgccggtttcgtggcgcgcatgagc
cgggccacgccctggttatggcttaagcttgctgcatcgctggacggccgcagcgcactg
cacaacggcgtgtcgcaatggattaccggcgaggccgcgcgtgcggacgggcatgcctgg
cgcgcgcgcgccgatgtcgtgctcaccggtatgggtacggtgttgaaggacgatccgcag
ttgacggtgcgcgccgtgcagacgccgcgtcagccgcgcaaagccgtggtggatgggcgg
tttcaggtgcctgagcacgcgcgcttgttcgatggcacaccggcctgggtgtttaccgcg
atccgggacgacgccaaggcggcgcgcctggcagacaagaatgtcgaggtcgtgtgcctg
cccgatgctggcggccagcgcgtggatctcgccgccatgatgcgctggctggcggcccag
gattgcaatgaagtgcatgtggaggcgggtgcgggattgtcgggcgcgttgctggctgcc
gattgcgtggacgaattgctcgtctacctggcgcccgtgatgctgagcgatgcggcaggc
atggtgcagatgcccatgctcgagcatctggatgcggcacgccgctttcgttttaccgat
cttgtccgggtgggcgaagacgtgcgcctgcaggcgcgcgatcacgcacgctggctggcg
cttctggccagcgcacggcgcgcctccgaacaatag

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