Bordetella holmesii 44057: D558_2884
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Entry
D558_2884 CDS
T03379
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
bhm
Bordetella holmesii 44057
Pathway
bhm00906
Carotenoid biosynthesis
bhm01100
Metabolic pathways
bhm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bhm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
D558_2884 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bhm01006
]
D558_2884 (hpnD)
Enzymes [BR:
bhm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
D558_2884 (hpnD)
Prenyltransferases [BR:
bhm01006
]
Terpene biosynthesis
Squalene/phytoene synthase
D558_2884 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AIT27540
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All DBs
Position
complement(2712464..2713327)
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AA seq
287 aa
AA seq
DB search
MTPDEYCQEKAAKSGSSFYYAFLFLPPERRRAITALYAFCREVDDVVDESTDAQLARVKL
GWWRTQIDAMFAGNPEHPVTRALQPHLQPHGLSRQRLLAVIDGMEMDLDQTRYLDWPGLR
KYCWHVAGVVGEMSAAIFGYSDDATLEYAAKLGLAFQLTNIIRDVGDDARRGRIYLPINE
LQQFEVKASDILNGTYSDNFSALMAFETARARELYREAMQALPAADIRAQRPGLMMAAIY
YALLEEIERDNWQVLHQRISLTPLRKLWLAWKTWVGGGRGVVRRLGR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgacgaatactgccaggagaaagccgccaaaagcggctccagcttctactac
gcctttctgtttctgcctcctgagcggcggcgcgccatcacggccctgtacgccttctgc
cgagaggtggacgacgtcgtggatgaaagcaccgacgctcaattggcccgcgtgaagctg
ggctggtggcgcacacagattgacgccatgttcgcgggcaaccccgagcaccccgtcaca
cgtgcgctgcaaccgcacctccagccccatggcctgagccggcaacgcctgctggctgtc
atcgacggtatggaaatggacctggaccaaacccgctatctcgattggccgggtctgcgc
aagtattgctggcatgtggctggcgtggtgggcgagatgtccgcggcgatcttcggttat
tccgatgacgccacgctggagtacgccgccaaactggggctggcgttccagctcaccaac
atcatccgtgatgtgggcgatgatgcccgtcgtgggcgcatttatctgcccatcaatgaa
ttgcagcagttcgaggtcaaggccagcgatattctcaatggcacttattccgacaatttc
tcggccttgatggccttcgagacggcgcgggcccgcgaactctaccgcgaagccatgcag
gcgctgcccgcagccgacattcgcgcccagcggcccggcctcatgatggccgccatctac
tacgcactgctggaagaaatcgaacgcgacaactggcaagtgcttcatcagcgtatttcg
ctcacgccgctgcgcaaactgtggctggcctggaagacctgggtgggtggaggtcgcggc
gtcgtgcgcaggttggggcgatga
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