Brachyspira hampsonii: BHAMNSH16_11315
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Entry
BHAMNSH16_11315 CDS
T05655
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bhp
Brachyspira hampsonii
Pathway
bhp03030
DNA replication
bhp03410
Base excision repair
bhp03420
Nucleotide excision repair
bhp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHAMNSH16_11315
03410 Base excision repair
BHAMNSH16_11315
03420 Nucleotide excision repair
BHAMNSH16_11315
03440 Homologous recombination
BHAMNSH16_11315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhp03032
]
BHAMNSH16_11315
03400 DNA repair and recombination proteins [BR:
bhp03400
]
BHAMNSH16_11315
Enzymes [BR:
bhp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BHAMNSH16_11315
DNA replication proteins [BR:
bhp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BHAMNSH16_11315
DNA repair and recombination proteins [BR:
bhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BHAMNSH16_11315
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHAMNSH16_11315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
RNase_T
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASJ22191
UniProt:
A0AAC9TX18
LinkDB
All DBs
Position
2577725..2580490
Genome browser
AA seq
921 aa
AA seq
DB search
MKKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYVAIAL
DSSRKTFRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGTIA
EKNKKENIKTIIYSPDKDILQLVCDDVRVVASNKDNELMEYDAQAVKEKRGVYPNQIIDL
LSLMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKGKVQEKLIESKDMAYMS
YKLATIERDIKDFNLDYNEIASSKINIDEVNKILDELELKQIRDKINSYIYGSSSAKKEE
KVKISDEKINNNDNQNKESPILSAKDNKASYYLIENETELQNLLNDINSKKLVCIDFETT
GLDVFKDAIIGISFAMKSNEAFYLDLSGRTKIDKEKCMNLVFDTLAKEDIKVIGHNLKYE
YKMMRAIGKSIGNMYFDTMVAAYLINPTRGRYNMDDLAIGYLSYNTIKYSDLTDNAKKTL
LDVPLKDVVEYACEDADVTFRFYECFAPLLKTHNLEELFFNIEMPLVSVLADMEFDGVYI
SSERMKALSDEYSSLLEKTKKKIYEEAGEEFNLQSPKQLEYILFDKIGIPPTKKTKTGFS
TDEEVLTELSQKYKIAEYMLTYRKYAKLKNTYLDVFPTLINEKTGRIHASFNQTVTATGR
LSSSEPNLQNIPVRGEEGREIRNTFIPEKGNLLIAADYSQIELRLLAHFSKDPALVEAFK
NNDDIHRKTAMKIYSVSKDHVTASMRNIAKIINFSIIYGKTAFGLSKELGIKRKEAEDFI
KGYFSTYSRVKPFCEEVVEEVRNKGYVRTMCGRIRDLSKTINSSNAMARNEAERMALNTL
IQGSAADMIKVAMVAIHKEFKNHLKTAKIVMQVHDELVVEVSEKEADKAMTIMKEIMEHS
VKTNVPITVDIHKGMSWGEVH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacatttcttattattgacgcttttggtatactttacagataccattttatt
tttttgaaaagacctcttttaaactctaaggggcagaatgtttcatctattaatggtttt
atgagaacttatttctcgcttattaatacatatccggcagaatatgttgctatagctttg
gatagttcgagaaaaactttcagaaatgaaatatataaagagtataaagagaatagagag
agcatgcctgatgatttaaggagtcagatacctatactttataatcttatagatgcttta
ggtatatcaaggatagttcttgacaattatgaggccgatgatatagtaggcactattgct
gaaaaaaacaaaaaagagaatataaagactattatttattctcctgataaggatatactt
cagcttgtttgcgatgatgtaagagttgttgcaagcaataaagataatgaacttatggag
tatgatgctcaggcagttaaagaaaaaaggggagtttatcctaatcaaataatagatttg
ctttctcttatgggagatgcttctgataatataccgggagttaaaggagtaggggagaaa
actgctttaaaacttctcgaagaatataaaagtttagatggaatatatgaaaatattgat
tccattaaaggaaaagttcaggaaaaattaattgaatcaaaagatatggcatatatgagc
tataaacttgctactattgaaagagatattaaagattttaatttagattataatgagata
gcaagcagtaaaataaatattgatgaagttaataaaatattagatgaattagaattaaag
caaataagagataaaatcaattcatatatatatggttcttcttccgctaaaaaagaagaa
aaagtaaaaatttctgatgaaaaaataaataataatgataatcaaaataaagaaagtcct
atacttagtgctaaagataataaagcaagttattatttaatagaaaatgaaaccgaactt
caaaatcttttaaatgatattaacagtaaaaagcttgtatgtatagactttgaaactaca
gggcttgatgtatttaaagacgctattataggaatttcttttgctatgaaatctaatgaa
gcattttatttagatttaagcggcagaacgaaaatagataaagaaaaatgtatgaatctt
gtatttgatactttagcaaaagaagatataaaggttatagggcataatcttaaatatgag
tacaagatgatgagggctataggcaaaagtataggcaatatgtactttgatactatggtg
gcggcatatttgattaatcctacaagaggaagatataatatggacgatttagctattggc
tatctttcatacaatactatcaaatacagcgatttaactgataatgctaaaaagacatta
ttagatgtacctttaaaagatgttgttgaatatgcttgtgaagatgctgatgtaacattt
agattttatgaatgttttgctccgcttttaaaaactcataatcttgaggaattatttttt
aatatagaaatgcctttggttagcgtacttgccgatatggaatttgacggagtatatata
agcagcgaaagaatgaaagctttatctgatgagtattcttcactattagaaaagactaaa
aagaaaatatacgaagaggctggtgaagagtttaatttgcagtctcctaaacagcttgag
tatatattattcgataaaataggaatacctcctaccaaaaaaacaaaaacaggattttct
accgatgaggaagtattaacagagctttctcaaaagtataagatagctgaatatatgctt
acatacagaaaatatgcaaaattaaaaaatacttatcttgatgtatttcctactttaata
aatgaaaaaacaggaagaatacatgcttcattcaatcaaactgtaacagcaacaggaaga
ttatcatcatcagaacctaatttgcagaatattcctgttagaggagaagaaggcagagag
ataagaaatacatttataccggaaaaaggtaatttacttatagcagcagactattcgcaa
atagaattaagattattagcacatttcagtaaggacccggcattagtagaggcattcaaa
aataatgatgatattcacagaaaaacagcaatgaaaatatattctgtaagtaaagatcat
gtaactgcctcaatgagaaatattgctaagataataaatttctctatcatttatggtaaa
acagcattcggactttcaaaagagcttggaataaaacgcaaagaagctgaagattttata
aagggatatttttctacttattcaagagtgaagcctttctgcgaagaagttgttgaggaa
gtaagaaataaaggctatgtacgaactatgtgcggaagaattagagatttatcaaagact
attaattcttcaaatgctatggctagaaatgaggctgaaagaatggcgttaaatactctt
attcaaggaagtgcagctgatatgataaaggttgctatggttgcaatacataaagagttt
aaaaatcatttaaaaactgccaaaatagttatgcaagttcatgacgaattagtagtagaa
gtttctgaaaaagaggcagacaaggctatgactataatgaaagaaataatggagcattct
gtaaaaactaatgttcctataaccgttgatatacataaaggtatgagctggggagaggtt
cattaa
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