Bradyrhizobium icense: LMTR13_19960
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Entry
LMTR13_19960 CDS
T04485
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bic
Bradyrhizobium icense
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bic03009
]
LMTR13_19960
Enzymes [BR:
bic01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LMTR13_19960
Ribosome biogenesis [BR:
bic03009
]
Prokaryotic type
ribosomal protein modification factors
LMTR13_19960
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ANW02107
UniProt:
A0A1B1UH64
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All DBs
Position
complement(4236225..4237550)
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AA seq
441 aa
AA seq
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MQQAAAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLGAIGEAMAENGKVIVTGCMGAEPEQIEAAYPGVLSISGPQQYESVLEAVHRALPPVH
NPHLDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPRLRGDLVSRPANDVLREAERLV
AAGVKELLVISQDTSAYGVDVKYAESSWKDRQVRAKFFDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMTEGKILPYLDIPFQHASPDVLKAMKRPAAQEKTLARIQKWREECPDLTLRS
TFIVGFPGETDSDFAYLLDWLEEAEIDRLGCFKYEPVAGAASNAIGNAVPDEVKQERWNA
LMARQQKISARRLKRKVGTRQQIIVDEVGPTVAKGRSKADAPQIDGAVYLSSRRPLKVGE
IVTAKIERADQYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggccgctgcgcccaagatcagctttgtttcgcttgggtgccccaaggcgctg
gtggattccgagcgcattatcacccggctacgcgctgaaggctatgagctggcccgaaag
catgacggcgccgacatcgtgatcgtcaacacctgcggcttcctcgacagcgccaagcag
gaatcgctcggcgccatcggcgaggccatggcggagaacgggaaggtcatcgtcaccggc
tgcatgggcgcggaacccgagcagatcgaggcggcctatccgggcgtgctctcgatatcg
ggcccgcagcaatatgagagcgtgctggaggctgtgcaccgggccctgccgccggtccat
aatccgcacctcgatctggtgccgccacagggcgtcaagctgacgccgcgccactacgcc
tatttgaaaatttccgaaggctgcaacaatcgctgcagcttctgcatcatcccaagactg
cgcggcgacctggtgtcgcgtccggccaacgacgtgctgcgcgaggcagaaaggcttgtc
gcagccggcgttaaggagttgctcgttatctcgcaggacacgtcggcgtatggcgtggac
gtgaagtacgcggagagttcgtggaaggaccgtcaggtccgcgccaaattcttcgacctc
gccaaggaactcggcgaactcggcgcctgggtgcggctgcaatatgtctacccctacccg
catgtcgacgaagtcatcggcctgatgacggagggcaagatcctgccctatctcgatatt
cccttccagcatgcgagcccggacgtcctgaaagccatgaagcgtcccgccgcgcaggag
aagacgctggcgcggatccagaagtggcgcgaggaatgtcctgacctgacgctgcgctcc
accttcatcgtcggtttccccggcgagaccgattccgattttgcttatttgctcgactgg
cttgaagaggccgagatcgatcgcctcggctgcttcaaatacgagccagtcgcgggtgct
gcatcgaatgcgatcggaaatgccgtgcctgatgaggtgaagcaggagcgctggaacgcg
ctgatggcgcggcagcagaagatctccgcccgtcgtctcaagcgcaaggtcggcaccagg
cagcagatcatcgtcgacgaagtcgggccgacggtcgcaaagggtcgttcaaaggccgac
gcgccgcagatcgatggcgcagtctatctctccagccgccgcccgctgaaggtcggcgag
atcgtgaccgcgaagatcgagcgcgccgatcaatacgacttgcacggcagcgtcgccgga
ttttga
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