Bradyrhizobium icense: LMTR13_27135
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Entry
LMTR13_27135 CDS
T04485
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
bic
Bradyrhizobium icense
Pathway
bic00860
Porphyrin metabolism
bic01100
Metabolic pathways
bic01240
Biosynthesis of cofactors
Module
bic_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LMTR13_27135
Enzymes [BR:
bic01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
LMTR13_27135
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
ANW03266
UniProt:
A0A1B1UKN9
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Position
complement(5806529..5809777)
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AA seq
1082 aa
AA seq
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MHVVFRESRGLEETAIPKDLGQDPADLVVLSFSDSDLAAFASGWRRGRACLPSLRLANLA
ELRHPLSVDTYIERTLSHARGILVRLIGGESYWSYGLAALHQLTKDRDIAVAVLPADGRD
DPYLDALSTLPASTLGRLKALCDKGGAMAAQAAIAQLALASGLYAGPVVGEIEMSEIGFY
DPGRGAIAVLPNCDQRPRALVTFYRSYLTAADTLPVDALITALRQAGFDAYGIFVTSLKA
AGVADWLKGQFEQCPPAVIVNATAFSAAADDGTTAFDAASGPVFQVALSTARREDWAESL
RGLSPGDLAMHVALPEIDGRLFAGVVSFKSAGERDPDLQFAQLAHRPDDERVGAVVDRVV
AWHRLADKPAGVKRLAIVLSNYPGRPHQLAHAVGLDALASVETMLSDLHAAGYDVKAAGA
LGETLLREELIFSVADYRTELARLSRPLQDDLARAWGAPENDPACRGGEFHFAAIQRGKA
IIAVQPERSDVTNRDAEYHDLSRTPRHAYVAFYLWLRQQEVDAVLHMGTHGTLEWLPGKS
VALSAACWPEALIGSAPVIYPFIVNDPGEAAQAKRRIGAVTIGHLPPPLARAALPEGLRR
LEQLLDEYSTADGLDPARRQRLIALVRDEARAAGLEEDLGLGALAAPAEAIPRIDRFVCD
LKESQFGDGLHVFGRGACGEAEKGALLDALSGRRVAPGPAGSPYRGRRDVLPTGRNLFAV
DPRAVPTPSAHVQGIKLAEELLRRHLQDHGDWPKGLLVDLWGSSTMRTAGEDFAMALHLA
GIAPRWDHGSGRVLGYEIIALAALGRPRIEVTLRVSGLFRDVFSSLAQLFEAATEALSER
DEEGEENPYRHRAAHVFGPRPGHYGVGMPSLPNVLTEEAREAAGEAWLSASSWAFASDGT
MRPDRTGIEARLVAADAFVHAQDLPETDLLLAADYAVHEAGIAAAAARLGMAAPSLYHLD
ATRPDRPQARSLTEELSRVVRARAANPTWIAGMMRHGFRGAAEIAATLDHMASFALLARA
VPPHLFDLYYEATLGNDEVRSFLARKNPAALATIEACFTRLHEASLWRTQRNSIAAALRE
AS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgtgtttcgcgagagccgcggtcttgaggagaccgcgatccctaaggatctc
ggtcaggacccggccgaccttgtcgtgctctcgttctcagacagcgatctcgccgcgttc
gcgtccggctggcggcgtgggcgtgcttgcctgccgtcgctgaggctcgcgaatcttgcg
gaactgcgtcatcccctatcggtcgacacctatatcgagcggacgctgtcgcatgcccgc
ggcatcttggtgcgcctgatcggtggcgagtcctactggtcatatgggctggctgccctg
catcaattgaccaaggatcgcgacatcgcggttgcggtgctcccggctgacggtcgcgac
gatccgtacctggatgcgctctcgacattacccgcctcgacgctcggacggctgaaggcg
ttgtgcgacaagggcggagcaatggcggcgcaggctgcaatcgcccagctcgcattggcc
tcgggcctttatgcggggcctgtcgtcggcgagatcgaaatgtccgagatcggtttttat
gatccaggtcgtggcgcaatcgcggtgctgccaaattgcgaccagcggccgcgcgcgctc
gtcaccttctatcgctcctatctcaccgcggcagataccctcccggtcgacgcgctgatc
acagcactgcgacaagcgggttttgatgcctatggcatattcgtcacatcgctaaaggcc
gcgggtgtagcggattggctgaaggggcagttcgagcaatgcccgcctgcagtgatcgtc
aatgcaaccgccttctctgcggccgccgacgacggcacgacggctttcgatgccgcctcc
ggcccggtgttccaggttgcgttgtcgacggcccggcgcgaggattgggcggagtcgctt
cgcggtctctcgccgggcgatctggcgatgcatgtagcgttgccggagattgacggccgg
ctgtttgcgggcgtggtcagcttcaagtcggcgggtgagcgcgatcccgatctgcaattt
gcgcagttggcgcacaggcctgacgacgaacgtgtcggtgctgtcgtggatcgggtggtg
gcctggcacaggctcgcggacaagccggcaggcgtgaagcggctggcgattgtgctctcg
aactatccgggccgtccgcaccagctcgcgcatgcggtcgggctcgacgcactcgcttcg
gtcgaaacgatgctgtccgatctccacgctgcgggttacgacgtgaaagcggcaggagcg
ctcggtgaaactctcctgcgggaggaattgatctttagcgttgcggattaccgcacggag
ctggcgaggctttcgcgcccgttacaggatgaccttgcgcgcgcgtggggcgcgccggag
aacgatcccgcctgtcgtggtggcgaatttcatttcgcagcgatccagcgtggcaaggcg
atcatcgccgttcagcctgaacgcagtgatgttaccaatcgtgacgcggagtatcacgat
ctctcgcgcacgcctcgccacgcctatgtcgcgttctatctctggctgaggcagcaagag
gtcgacgcggtcctccatatgggcacccacggaacgctggaatggctgcccggcaagtcc
gtggcgctgtccgctgcctgctggccggaagcgctgattggcagcgcgccggtgatctat
cctttcatcgtcaacgatcccggcgaggcggcgcaggccaagcggcgcatcggcgcggtc
acgatcgggcatttgccgccacctctggcgcgggcggctttgccggaaggcctgcgccgg
ctcgagcaactgctcgatgaatactcgaccgccgacggtctcgatcccgcgcgccgccag
cgcctgatcgcgttggtccgcgatgaagcgcgtgccgcgggactggaagaggatctcggc
cttggcgccttggctgcgccggccgaggcaattccccggatcgatcgcttcgtctgcgac
ctcaaggaaagccagttcggcgatggcctgcatgtgttcggccgcggggcttgcggcgag
gcggagaagggcgcgctgcttgacgctctctctggtaggcgcgttgctccggggcccgcc
ggctcgccatatcgtgggcggcgcgatgtgctgccgaccggacgcaatctgttcgccgtc
gatccccgcgcagtgccgacaccgtccgcgcacgtgcaggggatcaagctcgccgaggaa
ttgctgcgccgtcacctgcaggatcacggcgactggcccaaggggctgctggttgatctc
tggggatcatcgaccatgcgcaccgctggcgaggatttcgcgatggccctgcacctggca
ggcatcgcgccgcgctgggaccacgggtcgggtcgggtgttgggttatgagatcatcgca
ctggccgctcttggtcgaccgcgcatcgaagtgacgcttcgcgtgtcggggctgtttcgc
gacgtcttctcatcccttgcgcaattgttcgaggcggcgaccgaagcgctttctgaacgc
gacgaggagggcgaagaaaatccctatcgccatcgcgcggcgcacgtgttcgggccacgg
cccgggcattatggtgtcggcatgccatcgctgccgaatgttctgacggaggaggcgcgc
gaggcggccggtgaggcctggctttcggcctcgtcctgggcattcgcatcggacggcacg
atgcggcctgatcggacaggtatcgaggcaaggctcgtcgccgccgatgccttcgtccat
gcgcaggacctgccggaaaccgacctgctattagctgcagactatgccgtgcacgaggcg
ggcattgcggccgcggcggcgcgcctcggcatggccgccccatcactctatcatctcgat
gccacgcgcccggatcgtccgcaggcacgctcgttgacagaagagctgtcgcgcgtggtg
cgtgctcgcgctgccaatccgacatggatcgcgggcatgatgcgccacggcttccggggc
gcggccgagatagcagcgacgctcgaccacatggcctctttcgcccttctcgcccgggcc
gtgcctccgcatctcttcgatctttattacgaagcgacacttggcaatgacgaggtgcgg
agcttcttggcgcgcaaaaatccggcggcgctcgcgacgatcgaggcttgcttcactcgt
ttgcatgaagcttcgctctggaggacgcaacgcaattcgatcgcggctgcgctgcgggag
gcctcatga
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