KEGG   Bombus impatiens (common eastern bumble bee): 100743602
Entry
100743602         CDS       T04362                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
bim  Bombus impatiens (common eastern bumble bee)
Pathway
bim03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bim00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100743602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bim03019]
    100743602
Enzymes [BR:bim01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     100743602
Messenger RNA biogenesis [BR:bim03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     100743602
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N CbiA ATP_bind_1 AAA_16 AAA_22 MMR_HSR1 nSTAND3 CTV_P13
Other DBs
NCBI-GeneID: 100743602
NCBI-ProteinID: XP_003492904
UniProt: A0A6P3E1S3
LinkDB
Position
Unknown
AA seq 422 aa
MTDEKTQTQEFKLDPDCELRFEVETKNEKVSLELKSGLAEVFGTELVKGKKYEFTAGAKV
AVFTWQGCTVELVGKTDVSYVAKETPMGLYLNCHAAMERLREAAEKEDTRGPITMVVGPC
DVGKSTLCRLLLNYAVRMGRRPIFVDLDVGQGHIAIPGTVGALLVERPSNVVDGFSQQAP
LVFHFGHKTPQANVALYNLLVTRLAEVCSDRLQANKKARVSGIVINTCGWVKGDGYKLLT
HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSQTQRTEARDQGVRE
YFYGSRTPLYPHSFEVKWSEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTPGPNLLH
HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVDRQTFTVLSPQPRPLPNTVLLLSDIQFMD
SH
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgacagacgaaaaaacgcaaacacaggagtttaaattagatccagattgtgaattacga
tttgaagttgaaacaaaaaatgaaaaagtttcgctagagttgaagagtggattagctgaa
gtttttggtacagaattagtgaaaggcaaaaaatatgaatttactgctggtgctaaagta
gctgtatttacttggcaaggttgtacagtagagttagttggaaaaactgacgttagttat
gtagccaaagagaccccaatgggtctttatttaaattgtcatgctgcaatggaaagactc
agagaagctgcagagaaagaagacactaggggtcccataacaatggttgttggtccttgt
gatgtaggaaaatcaactctttgtagacttttattaaattatgcagttaggatgggtcgt
aggccaatttttgtagacttggatgttggtcaaggtcacatagcaataccaggtactgtt
ggagcactattagttgaacgtccatcaaatgtagttgatggtttcagtcagcaggcacca
ttagtctttcactttggacataaaactccacaagctaatgttgctctttataatcttctt
gtaacgcgccttgcagaagtctgttctgatagacttcaagcaaataaaaaagccagagtt
tcaggaatagtaataaacacatgtggttgggtaaaaggagatggatataaattgttgaca
catgctgctcaggcttttgaagtagatgcgattctggtattggatcaagaaagattgtac
aatgaacttgttagagatatgccagactttgttaaagttgtattccttccaaaaagtggt
ggagttgtggaaagaagtcaaactcaaaggacagaagccagagatcaaggtgtcagggaa
tatttctatggttctaggacaccactttatccacacagttttgaagtgaaatggagtgag
gctagattatacaaaattggagctccagtgcttcccgcatcttgtatgcctcttggaatg
aaggcagaagataatttaacaaaattagtagctgttacacctggaccaaatcttcttcat
catctattatctgtttcatttgctgattcaccagaagatgatgtagtgcaaactaatgtg
gctggatttgtctgcgtaaccaatgttgatgttgacagacaaacatttacagttctgagt
ccacagccaagaccattgccaaatacagttttattgctttcagatatacaatttatggat
agtcattaa

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