Bombus impatiens (common eastern bumble bee): 100745752
Help
Entry
100745752 CDS
T04362
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100745752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bim03400
]
100745752
DNA repair and recombination proteins [BR:
bim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100745752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Motif
Other DBs
NCBI-GeneID:
100745752
NCBI-ProteinID:
XP_003492265
UniProt:
A0A6P3DVC6
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MSKVNTLYNYFISPKTPKTPKQSNNKPDEKPSTPKRSREQWNKARIPSKGKENIDVKDKK
NVSKDDDDEEEETEENEPIQPKKRRLIIPDEESGEDSGDEFKPDPEDESEDSDSVSEGVS
KSEPPTASEEESPEKKIKLAKAPRRKPEISTMKNTKDAKKESKPQQQNQTKGSDSVTESW
PHLKYDFLQPNKIRDIRRKPPSDPDYDPKTLYVPPDFLNQQTPAMRQWWELKSKHFDCVL
FFKVGKFYELYHMDAVISVNEINLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQ
TENPDMMAQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASTANSNYLLSLIEK
CPSGSNTSHYGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKTL
KILNNTLAACIKEPLLRESQFWSSSTTLKNLHEGEYFKSSDTQFQWPAGLQPYLNQNDTL
GLTSADDKELAVHALGGCVYLLKEYLLEQQLLAQGRFKTYTPPDFSNEKSVASNFANNMV
LDAITINNLRIFGEGSLMKTLDRCCTAFGKRLLREWICRPSCRKNIIIERQQAIQELMDN
TEVMQNARSILAGLPDLERLLSKIHAQGNAAKMNNHPDGRAIMFEGQTYSKKKIADFIVT
LSAFEDVLKIVALFEDFKSTIVSRCTKIEPDGEFPSLRESLDYFKTAFDHEEAKKVGCIV
PKRGVDSEYDSVLIELDDVKADAQEYLEKQKKHFGVKVTFHGSDKKRYQIEIPDSQIKKI
GAGYELQSQRKGYKRYYTAETKELLSRQINAEEHRDKVLKDLNRRIFAKFSEKYDMWNMA
VYKLSVLDVLISLAEYALSGDMCIPEVNDGTDERVFIDIRDGWHPCIISDTFIPNNTLLG
TENSASFMILTGPNMGGKSTLMRQVALLTIMTQIGSYVPASSCRLTLVDRIFTRLGANDD
ILAGQSTFLVELSETAAILQHATPYSLVLLDELGRGTSTYDGTAIAASVVNALTKLNCRT
LFSTHYHSLVEDYKNTKEITLAHMACMVENEEQDEVSQETVTFLYKLSEGACPKSYGFNA
ARLAGVPSVITNRAHEISKKLEQETNYKHLFTSLCKANGTAIRDLIAAM
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgaatacattgtacaattattttatttcgcctaaaactcctaaaactcct
aaacaatcgaataataagcccgatgaaaaacctagcacgccgaaaagatcaagagaacaa
tggaacaaagcaaggattccaagcaaaggaaaagaaaatatagatgtcaaagataaaaaa
aatgtctctaaagatgatgatgacgaagaagaggaaacggaagaaaatgaaccaatacag
ccaaaaaagcgaagattgattatccctgatgaagagtctggagaagattctggtgatgaa
tttaagcctgatccagaagatgaatcagaagattctgattcagtatctgaaggagttagt
aaaagtgagccaccaacagcaagtgaagaggaatctccagagaagaaaataaaattggct
aaagctcctagaagaaaaccggaaataagtacaatgaaaaataccaaagatgctaaaaaa
gaatcaaaaccacagcaacaaaatcaaaccaaaggttcagacagtgttacagaatcttgg
ccacatttaaagtatgattttcttcaaccaaataaaatacgagatattcgtagaaaacca
ccaagtgatccagattatgatcctaaaactctttatgttcctccggatttcttgaatcaa
caaactccagccatgagacaatggtgggaattaaaaagcaaacatttcgattgcgttctt
ttctttaaagtagggaagttttacgaattgtatcatatggatgctgtaattagtgtcaat
gaaatcaatcttacatatatgagaggagaatttgcgcattcgggatttccagaaattgga
tatggtcgtttctcagcaagtctcatagaaagaggctacaaagtggccagggtagaacaa
acagaaaatccagacatgatggcgcaacgttgtagcaaaatgactaggccaacaaagttc
gacaaagtagttaaacgagaaatttgtcaaataagcagtaaaggtacaagagtatacact
ccacaggatgtagaagcatctacggcaaattccaattatttgctgtcactaattgaaaaa
tgtccatctggttcaaacacatctcattatggagtgtgtttcttagatactacaatagga
gacttctatcttggtcaattcgaagacgatcggtgcaattctagaatactaactttgctc
gctcattatccgccagttcatgtggtttatgaacgaggtaatttgtctcaaaagacccta
aaaatcttaaacaacactttagcagcatgtattaaagaaccacttttgcgcgaatctcaa
ttttggtcatcttcgactacgttaaaaaatcttcatgaaggagaatacttcaaaagttca
gacactcagtttcaatggcctgcaggcttacaaccgtatcttaaccaaaatgatacttta
ggtttaacttctgctgatgataaagagttagcagtgcatgccttaggtggttgtgtatat
ttactcaaagaatatctgcttgaacagcaattattagcacaaggacgttttaaaacatat
actccgccagatttttcaaatgagaaatctgtggcttcaaactttgcgaataatatggtt
ttagatgctattacgattaataatttgagaatattcggcgaaggttctctcatgaaaaca
ctggatcgctgctgtactgcattcgggaagaggttattgcgagaatggatttgcagacca
tcctgtcgcaaaaacattataatcgaacgtcaacaagctatacaagaattaatggataat
acagaggtgatgcaaaatgctcgtagtatattagcaggactccctgatcttgaaagatta
ttaagcaagatccatgcacaaggaaatgcggcgaaaatgaataatcatccagacggcagg
gcgattatgttcgagggtcaaacgtattcaaagaaaaagattgcagattttattgttact
ctgagtgcgttcgaggatgttctaaaaattgttgctttgttcgaagatttcaagagtact
atagtaagtcgatgtactaaaatagagccggatggcgagtttccttcattaagagaatca
ttagattatttcaagactgcattcgatcacgaagaagccaaaaaggtaggctgtattgtt
ccaaagagaggagtcgatagtgagtacgattctgttttaatagaattggatgatgtaaag
gcagatgcccaagagtaccttgaaaagcaaaaaaagcactttggcgtgaaagtcacgttt
catggatcggataagaaacgttatcaaatcgagattccagattctcaaataaagaaaatt
ggtgccgggtatgagcttcaatcacaaaggaaaggatacaaacgctattacactgccgag
actaaggaacttttaagtcgacaaataaacgcagaagaacacagagataaagtactaaag
gatttaaacagaagaatatttgcaaaatttagcgagaagtatgatatgtggaatatggcg
gtttataagttatctgtcttggatgttcttatctctttggcggaatacgccctcagcgga
gatatgtgtataccagaagttaacgatggtacagacgaaagggtatttatcgatattcga
gacggatggcatccatgtattatctccgatacatttataccaaataacactttactagga
actgaaaattctgcttcttttatgattcttactgggccgaatatgggtggtaaatcaaca
ttgatgcgtcaggtcgcccttcttactataatgacgcaaattggaagttacgtccctgca
agttcctgccgtttgacattagtggatcgtattttcacaaggctcggcgcaaatgatgat
attctagctggtcagagtacgttcttggtagagttgagcgaaactgctgcgatattacag
cacgctacgccatactcgctagtgttgcttgatgaattgggtcgtggtacgtcgacgtat
gacggcacggcaatagccgcttcagttgtgaatgcacttacaaaattgaattgccgtact
ctattttcgacacattatcattctttggtagaagattataagaacacaaaggaaattaca
ttggcccatatggcatgtatggtagaaaatgaggaacaggatgaagtatctcaggaaaca
gtaacatttttgtacaaacttagcgagggagcttgtccgaaatcatacggttttaacgct
gctcgattagctggcgtcccatctgtaattacaaacagagcgcatgagatctcaaagaaa
ctcgaacaagagacaaattataaacatctcttcaccagcctatgtaaggcgaatgggaca
gccataagggatctaatcgctgcaatgtga
DBGET
integrated database retrieval system
