Bos indicus (zebu cattle): 109555311
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Entry
109555311 CDS
T04792
Symbol
TFE3
Name
(RefSeq) transcription factor E3 isoform X1
KO
K09105
transcription factor E3
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04137
Mitophagy - animal
biu05202
Transcriptional misregulation in cancer
biu05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109555311 (TFE3)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
109555311 (TFE3)
09162 Cancer: specific types
05211 Renal cell carcinoma
109555311 (TFE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109555311 (TFE3)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
109555311 (TFE3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
109555311
NCBI-ProteinID:
XP_019811650
UniProt:
A0A6P5BM73
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Position
X:55399505..55411102
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AA seq
598 aa
AA seq
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MSHAAEPAQDGVEASAEGPRAVFLLLEDRRPADSAQLLSLNSLLPESGIVADIELENVLD
PDSFYELKSPPLSLRSSLPISLQATPATPATLSASSSAEGSRTPAMSSSSSSRVLLRQQL
MRAQAQEQERRERREQASSFPSPAPASPAISVVGVSAGGHTLGRPPPAQVPREVLKVQTH
LENPTRYHLQQARRQQVKQYLSTTLGPKLXXQALTPPPGGASVQPLPTPEAAHAPGPTSS
APNSPMALLTIGSSSEKEVSGCRRPSHVPPTPASSNAPLYFSQIDDVIDEIISLESSYND
EMLSYLPGGNTGLQLPSTLPVSGNLLDVYNNQGVATPAITVSNSCPAELPNIKREISETE
AKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIR
KLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSLAATSASD
SLKPEQLDVEEEGRPGTAIFHATGGLAQSAPHQQPPPPPSDALLDLHFPSDHLGDLGDPF
HLGLEDILMEEEEGVVGGLSGGTLSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatgcggccgagccagctcaggacggcgtagaggccagcgcggagggccctcga
gccgtgttcctgttgttggaggaccgcaggccggccgactcagcccagctgctcagcctg
aactctttgcttccggagtccgggattgttgctgacatcgagttagaaaacgtccttgat
cctgacagcttctacgagctcaaaagcccacccctatcgctacgctcaagcctcccaata
tcactgcaggccacaccagccaccccagctacactatctgcatcatcttctgccgagggc
tccaggacccctgccatgtcatcctcttcttcatcgcgggtcttgctgcggcagcagcta
atgagggcccaggcccaggaacaggagaggcgtgagcgtcgggaacaggcctcttccttc
cctagtcctgcacctgcctctcccgccatctctgtggttggcgtctctgctgggggccac
acactgggtcgtcctcccccagctcaggtgcccagggaggtgctcaaggtgcagacccat
ctggagaacccaacacgctatcatctacagcaggcgcgccgacagcaggtgaaacagtac
ctgtccaccacacttgggcccaaactnnnnncccaggccctcaccccaccaccagggggt
gctagtgtccagccgctccccacccccgaggctgcccacgctcctggccccaccagcagt
gctcccaacagccccatggcgctgctcaccatcgggtctagctcagagaaggaggtgagt
ggctgcagacgaccctcacatgttccccctaccccagcttcttctaatgctcctctgtat
ttctcccagattgacgatgtcatcgatgagatcattagcttggagtccagttacaatgat
gagatgctcagctatctgcctggaggcaacacggggctgcagctccctagcacactgcct
gtgtcggggaatctgcttgatgtgtacaataatcagggcgtagccacgccagccatcact
gtcagcaactcctgtccagctgagctgcccaatatcaaacgggagatctctgagacggag
gccaaggcccttttgaaggaacggcagaagaaagacaatcacaatctgattgaacgtcgc
aggcgattcaacattaacgacaggatcaaggagttgggcaccctcatccccaagtccagt
gacccggaaatgcgctggaacaagggcaccatcctaaaagcctccgtggattacatccgc
aagttgcagaaggagcaacagcgctccaaagacctggagagccggcagcgatccctggag
caagccaaccgcagcctgcagctccgaatccaggagctggagctgcaggcccagatccat
ggtctgccggtgcctcccacgccagggctgctctcgctggctgcaacttcagcctctgac
agtctcaagccagagcagctggatgttgaagaggaaggcaggccaggcacagcaattttt
catgcaacagggggccttgcccaaagtgctccccatcagcagccgccaccaccaccctca
gatgcacttctggacctgcactttcccagcgaccacctgggggatctgggggaccccttc
catctggggctggaggacattctgatggaggaggaggagggggtggtggggggactgtca
gggggcaccctgtccccactgcgggctgcctctgatcccctgctttcttcagtatcccct
gcagtctccaaggccagcagtcgccgcagcagcttcagcatggaagaggagtcctga
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