KEGG   Bos indicus (zebu cattle): 109565179
Entry
109565179         CDS       T04792                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03020  RNA polymerase
biu03420  Nucleotide excision repair
biu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109565179 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109565179 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    109565179 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:biu03021]
    109565179 (POLR2D)
   03400 DNA repair and recombination proteins [BR:biu03400]
    109565179 (POLR2D)
Transcription machinery [BR:biu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109565179 (POLR2D)
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109565179 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 109565179
NCBI-ProteinID: XP_019824510
UniProt: A0A6P5CFP6
LinkDB
Position
2:4640848..4654038
AA seq 142 aa
MAAGGSDPRSGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggcggtagcgatccgcgctctggagatgtagaggaggacgcgtcacaactc
atctttcccaaagagtttgaaacagctgagacgcttctgaattccgaagttcatatgctt
cttgagcatcgaaagcagcagaatgagagtgcagaggatgagcaggaactttccgaggtc
ttcatgaaaactttaaattacactgcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgtccgtagcttgctgctccagaagaagcttcataagtttgagctggcctgttta
gccaacctttgtccagagactgctgaggagtccaaggctctgatcccaagcctggagggg
cggtttgaagatgaggagctacagcagattcttgatgacatccagaccaagcgtagcttt
cagtattaa

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