KEGG   Bos indicus (zebu cattle): 109572246
Entry
109572246         CDS       T04792                                 
Symbol
POLR2C
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03020  RNA polymerase
biu03420  Nucleotide excision repair
biu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109572246 (POLR2C)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109572246 (POLR2C)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    109572246 (POLR2C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:biu03021]
    109572246 (POLR2C)
   03400 DNA repair and recombination proteins [BR:biu03400]
    109572246 (POLR2C)
Transcription machinery [BR:biu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     109572246 (POLR2C)
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109572246 (POLR2C)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 109572246
NCBI-ProteinID: XP_019834409
UniProt: A0A6P5DAG3
LinkDB
Position
18:25229864..25238269
AA seq 275 aa
MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLXAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtacgccaaccagcccacagtgcggatcacggagctcaccgacgagaatgtcaag
ttcatcatcgagaacacggacctggcggtggcaaattctatccggagggtcttcatcgct
gaggtgcccataatagcaattgactgggttcagattgatgccaattcctccgtccttcat
gacgagttcattgctcacagacttggattaatccctctcaccagtgacgacattgtggac
aagttgcagtactcccgggactgcacgtgtgaagagttctgccccgagtgctcggtggag
ttcactctggacgtgcggtgcaacgaagaccagacgcgtcatgtcacgtctcgagacctc
atctccaacagcccccgggtcattccggtgacatctaggaaccgagataatgaccccaat
gactacgtggagcaggacgacattctcatcgtcaagctgagaaagggccaggagctgaga
ctgcragcctatgccaaaaaaggctttggcaaggaacatgccaagtggaacccaactgca
ggagtggcttttgagtatgaccctgacaatgccctgaggcacacggtgtaccccaagcca
gaggaatggccaaagagtgagtactcagagctggatgaggatgagtcgcaggcaccctac
gaccccaacggcaagccagagaggttttactacaatgtggagtcttgtggctctctgcgc
cccgagaccatcgtcctttcagccctctctggattaaagaagaagctgagtgatttacag
acccagttaagccacgagatccagagtgacgtcctcaccataaactag

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