Bos indicus (zebu cattle): 109575422
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Entry
109575422 CDS
T04792
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
biu03016
]
109575422 (LCMT2)
Enzymes [BR:
biu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
109575422 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
109575422 (LCMT2)
Transfer RNA biogenesis [BR:
biu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109575422 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_4
Kelch_6
Kelch_3
Kelch_2
Kelch_5
Kelch_1
NinE
Motif
Other DBs
NCBI-GeneID:
109575422
NCBI-ProteinID:
XP_019839085
UniProt:
A0A6P5DPK3
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Position
21:complement(55552560..55555325)
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AA seq
685 aa
AA seq
DB search
MGSRNRERRAEAVQSTNDSSALSKSSLAARGYVHDAFAALLVPGTARRAPLIHRGYYVRA
RAVRHCVRAFIEQTCAAPGTPRAQILSLGAGSDSLYFRLKTAGHLAGAAVWEVDFPDVAE
RKAQRIRDTPDLCALTGPFQSGDHGSTLCFESSDYRILGLDLRQLQRXXQALAAAGLDAA
FPTLLLAEAVLTYLEPDDAAALIAWAAQRFSNAIFVVYEQMRPQDAFGEFMQQHFRHLNS
PLHGLDRFPDAEAQQQRFLQAGWTACRAMDLNEFYRCFLPAEERRRMENLEPFDEFEEWH
LKCAHYFILAASRGDSLSQTLVFPPSETFPRIDPASPSGVFPASVVTGDTQGLGLKRYGH
ASVLLSPGVILSAGGFGEQEGRHCRVSKFHMLLRYSDFEWKGNQIGSWGTGAQWDGRLYH
TMTRLSDTQVLVLGGRLSPVTPALGILQLCCENEDNSTEDPIVTVTKFGPEEDSTLSRWR
HSTTEVSCENQKYLFVYGGRSVAEPVLSDWHFLHVGTMTWVRIPVEGEGPEGRHSHSACS
WQGGALIAGGLGVSEEPLSSVFFMKPITSGFLWESIAIQPPITPRYSHTAHVINGKLLLV
GGVWIHSSAVPGVTVIALSTGLSFEYQIDTTCVPWPLMLHNHTSILFPEEQQLLLLGGGG
NCFSFGTYFNPHTVTLDLSPLRARQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgcgcaaccgcgaacgtcgggctgaggcagtgcagagcaccaacgacagtagc
gcgctcagcaagagctccctggccgcgcgcgggtatgtgcacgacgccttcgctgccttg
ctggttccggggacggcccgccgcgcgccgcttatccaccgcggctactacgtccgcgca
cgcgccgtgcggcactgcgtgcgcgccttcatagagcagacgtgcgcggcccccggcact
cctcgtgcgcagattctgtcgctgggcgccggctcagactcactgtattttcgtctcaaa
actgcgggccacctggccggggctgctgtctgggaggtggattttccggacgtggcygag
cgtaaagctcagaggattcgagatacgccggatctgtgcgcgttaaccgggcctttccag
agtggagaccacgggtccacgctgtgctttgagagctcggactaccgcatcctgggcctg
gacctgcggcagctgcagcgnnnnnaccaggcccttgccgccgcgggtcttgacgctgcc
ttcccgactctgctcctggctgaggccgtgctcacctacctcgagccggatgatgccgcg
gccctcatcgcctgggccgcccagcggttttctaatgccattttcgtcgtctacgagcag
atgaggccgcaggacgcctttggcgagtttatgcagcaacattttcggcacctgaattct
ccccttcatggcctggaccgctttcccgacgcggaggcccagcagcagcgcttccttcag
gccggctggactgcctgtcgcgccatggacctgaatgaattctatcgctgctttctcccc
gcagaagaacgccgacgcatggaaaatcttgaaccttttgacgagtttgaagagtggcat
ctgaagtgtgcccactatttcattctagccgcttctcggggagacagcctctcccagact
ctggtgtttccaccctcagagacgtttcctcggatagatcctgcttccccttcaggagtc
ttccctgccagtgtagtcactggggacacccagggcttgggccttaagagatacggccac
gcctctgtccttttgagcccaggcgttattctcagtgcaggaggatttggagagcaggag
gggcgacattgccgagtgagcaagtttcacatgctcttaagatacagtgactttgaatgg
aaaggcaaccagataggcagttggggaactggagctcagtgggatggacgcctttatcac
accatgacaagactttcagatactcaggttctggttctaggagggagactgtccccagta
actccagccttggggatactccaactttgttgtgagaatgaggataatagcactgaggac
ccaattgtaacagtcacgaagttcggtccagaagaagattccaccttgtcacgttggcgc
cattcaacaacagaagtgtcctgtgagaatcagaaatatttgtttgtgtatgggggccga
agtgtggcagaacctgtactaagtgactggcatttcctccatgtggggacaatgacttgg
gttaggatcccagtggagggagaaggacctgaaggtcgccattcccacagtgcctgcagc
tggcaagggggagccctcattgctggaggtctgggtgtttctgaggagccactgagctct
gtattctttatgaaaccaatcactagtggatttctctgggaatctatmgccatccagcct
cccattaccccaaggtactcccacacagctcatgtaatcaatgggaagcttttgttggtt
ggaggcgtctggattcattcctctgcagttcctggagtgactgttattgctttgtctaca
ggattgagctttgagtatcagattgacacaacatgtgtgccatggccattaatgttacac
aatcataccagcatcctctttcctgaagagcaacagctcctgctccttggaggtggtggg
aactgcttttcttttggcacctacttcaacccccatacagtgacattagacctttctcct
ttaagagctagacagtaa
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