Bradyrhizobium diazoefficiens USDA 110: bll3177
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Entry
bll3177 CDS
T00109
Symbol
bll3177
Name
(GenBank) ORF_ID:bll3177; Probable arginine/lysine/ornithine decarboxylases
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00330
Arginine and proline metabolism
bja00480
Glutathione metabolism
bja01100
Metabolic pathways
bja01110
Biosynthesis of secondary metabolites
bja04148
Efferocytosis
Module
bja_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
bll3177 (bll3177)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
bll3177 (bll3177)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
bll3177 (bll3177)
Enzymes [BR:
bja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
bll3177 (bll3177)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAC48442
UniProt:
Q89QF1
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Position
complement(3512264..3514780)
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AA seq
838 aa
AA seq
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MIVGLAEAPPHPNCCAIRLSPQAGRGETPAAAPVIQLSSNVPRAVSPVHSGQTMDYFKRF
NFLFAAPVFDADDLEGVRFNQIIEEIQRSGFEVVRARKLEDAEIAVQTDAAIGCMVVDWG
KKGLEGKTSALINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEETPTFIAK
NLISRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGVFYNRSPIGRVFVEHLGESV
FRDDLDNSVLDLGDLLTHEGPALKAQKEAAAIFGAEKTYFVLNGTSTSNKVALGALVTDG
DLVLFDRNNHKAAHHGALMINGGIPVYVPTIRNAWGLIGPMRWDVLDEKALREAIRNHPL
VRDRDAWRKERPFRVAVVEQCTYDGSIHSAEMILKRIGHLCEYILFDEAWAGFMKFHPLY
AGRFAMGLANLPPEAPGIIATQSTHKQLASFSQASQIHIKDRHIRGQKRRVEHRRFNESF
MQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAMRREFEEKEQNP
DRRWFFEPFVPDRVAIPDVSRPGAAHNVAWETLSTDELATNPALWQLSPDTNWHGFPDLA
EGFAMTDPNKLTLLTPGFDRTTGAYAEHGIPAPVVAQYLRENRIVPEKNDLNSLLFLLTP
GVEASKAGTLISGLVAFKRLHDDNALLADAIPEFYQRRQARYAGVRLRDLCGDMHRFFRA
ADVSALQARQFMPEHMPEIAMSPRDAARYLFRNDVDYLPIEAIAGRIATTPFVVYPPGIA
TIVPGERLTERAKPMVDYLKMFETCFNTFPGFDVEIQGVYKEIDAQGRIGLYTYVVAE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
gtgatagtcggactcgcggaagctcctcctcacccgaattgctgcgcaatccgcctctcc
ccgcaagcggggagaggcgaaacgccagccgcagctcctgtcatccaactgtcatcgaat
gtgccgagagctgtgtctccagtacattcgggacagacaatggactatttcaagcgcttc
aacttcctgttcgccgcacccgtgttcgacgccgacgacctcgaaggcgtccgcttcaac
cagatcatcgaggaaatccagcgctccggcttcgaggtcgtccgggcccgcaagctggag
gacgcggagatcgcggtgcagaccgacgccgcgatcggctgcatggtggtggactggggc
aagaagggcctggagggcaagacctcggcgctgatcaatttgatgcggcgccgcggcctc
gacttcccgatcatcctgctgatccggcgcaagcggttcgaggatctgccggtcgaggtg
ctcgacttcatcgacggctatgtcttcctctccgaggagacgccgaccttcatcgccaag
aacctgatcagccggctcaagcaatatgccgagacgctgaagacgccgttcttcggcgcg
ctggtcgactatgccgaggaaggcaaccagctctggacctgtccgggccacaatggcggc
gtgttctacaatcgcagcccgatcggccgggtgttcgtcgagcatctcggcgaatccgtg
ttccgcgacgacctcgacaattccgtgctcgacctcggcgacctccttacccatgagggc
ccggcgctgaaggcgcagaaggaggcagcggcgatcttcggcgcggagaagacctatttc
gtgctcaacggcacctcgacctcgaacaaggtcgcgctcggcgcgctcgtcaccgacggc
gatctcgtgctgttcgaccgcaacaaccacaaggccgctcatcacggcgcgctgatgatc
aatggcggcatcccggtctacgtcccgaccattcgcaacgcctggggcctgatcggcccg
atgcgctgggacgtgctcgacgagaaggcgctgcgcgaggcgatccgcaaccatccgctg
gttagggatcgcgacgcctggcgcaaggaacggccgttccgcgtcgccgtggtcgaacag
tgcacctatgacggctcgatccacagcgccgagatgatcctgaagcgcatcggccatctc
tgcgaatacatcctgttcgacgaggcctgggccggcttcatgaaattccacccgctctat
gccggccgcttcgccatgggcctcgcgaaccttcccccggaagcgcccggcatcatcgcg
acgcagtcgacccacaagcaactcgcgagcttctcgcaggcctcgcaaatccacatcaag
gaccgtcacatccgcggccagaagcggcgcgtcgagcatcgccgcttcaacgaaagcttc
atgcagcacgcttccacgtcaccgttctatccgctgttcgcatccctcgacgtcggcgcg
cagatgatgaaggggcgctccggcgaagtgctgtgggacgacacgatccggctcggcatc
gagctgcgcaagaagatccgcgcaatgcggcgtgagttcgaggagaaggagcagaacccc
gatcggcgctggttcttcgagcccttcgtcccggatcgcgtcgccatccccgacgtcagt
cgccccggcgccgcccacaatgtcgcctgggagacgctgtccaccgacgagctcgccacc
aatcccgccttgtggcaactctctccggataccaactggcacggctttcccgatctcgcg
gaaggctttgccatgaccgatccgaacaagctgacgctgctcacgcctggcttcgatcgc
accaccggcgcctatgccgagcacggcatccccgcccccgtcgtcgcgcaatatctgcgc
gagaaccgcatcgtgcccgagaagaacgacctcaactccctgctcttcctgctcactccc
ggcgtcgaggcgagcaaggccggcacgctgatctccggcctcgtcgccttcaagaggctg
cacgacgacaatgcgttgctggcggacgcaatcccggaattctaccagcggcggcaggcg
cgctatgccggcgtgcggctgcgcgatctctgcggcgacatgcaccgtttcttccgcgcc
gccgatgtcagcgcgctccaggcgcggcagttcatgcccgagcacatgcctgagatcgcg
atgtcgccccgcgatgccgcccgctatttgttccgcaacgacgtcgactatctgccgatc
gaggcgatcgcgggccgcatcgccaccacgcccttcgtagtctatccgcccggcatcgcc
accatcgtgcccggcgagcggctgacggaacgcgccaagcccatggtcgattatctcaag
atgttcgagacctgcttcaacacgttcccgggcttcgacgtcgaaatccagggcgtctac
aaggagatcgatgcccagggccgtatcgggctctatacttacgtcgttgccgagtag
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