Cytobacillus kochii: CKF48_16515
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Entry
CKF48_16515 CDS
T05194
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bko
Cytobacillus kochii
Pathway
bko03030
DNA replication
bko03410
Base excision repair
bko03420
Nucleotide excision repair
bko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKF48_16515
03410 Base excision repair
CKF48_16515
03420 Nucleotide excision repair
CKF48_16515
03440 Homologous recombination
CKF48_16515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bko03032
]
CKF48_16515
03400 DNA repair and recombination proteins [BR:
bko03400
]
CKF48_16515
Enzymes [BR:
bko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKF48_16515
DNA replication proteins [BR:
bko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CKF48_16515
DNA repair and recombination proteins [BR:
bko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CKF48_16515
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKF48_16515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
ASV68747
UniProt:
A0A248TKL3
LinkDB
All DBs
Position
3236195..3238831
Genome browser
AA seq
878 aa
AA seq
DB search
MTKKKLVLIDGNSIAYRAFFALPLLNNDKGIHTNAVYGFTMMLMRILEDEKPTHILVAFD
AGKTTFRHKTFTEYKGGRQKTPPELSEQFPVIRELLDAYQIARYELENYEADDIIGTLSL
IAEQDDFEVKVISGDKDLTQLSSEKTTVGITKKGITDIEEYTPQHIEEKYGISPERIIDM
KGLMGDSSDNIPGVPGVGEKTALKLLKEFGTLEQLVQSIDQVSGNKLKEKLEEFQDQALM
SKELATILREAPIEVELDKIAYEGWNEDKLYHLFKDLGFNSLLEKISFDLAEDGTAELEE
INFEIVTDFTEEQLDGDSALYIEVLEDNYHYADILGIAVTNKNGNFFISTKNACQSNVFK
KWAEDDASPKVVYDAKRSEVSLRHHGIHLKGIHFDILLAAYIINPSETIEDLASIARNHG
YSAVQSDQAFYGKGAKRSIPKEEELAPHIVRKAVAMDSLYEKLDTSLQTNQQSALFYELE
LPLSLILADMESAGIKVDLKRLRSMGTELLEKLAAIENRIHAYAGEAFNINSPKQLGVIL
FDKLRLPVMKKTKTGYSTSADVLEKLESKHEIIKEILEYRQLAKLQSTYIEGLLKVVNKE
TDKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSKKDWVIFAADYSQIE
LRVLAHIAGDEKLISAFKEDLDIHTKTAMEVFHVSKEEVTANMRRHAKAVNFGIVYGISD
YGLSQSLSITRKEAGEFIDRYLTSYPAVKQYMEDIVQEAKQKGFVETLLHRRRYLPEITS
RNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMADRLENEQLQSKLLLQVHDELIFEAPV
EEIEKLKEIVPDVMEHAVELKVPLKVDYSYGPTWFDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaaaaactcgtattaatagatggaaatagtattgcttatcgagcttttttt
gctcttccattattaaataacgataaaggcatacatacgaatgcagtctatggatttacg
atgatgcttatgcgcattttggaagatgaaaaacctactcatattcttgttgcatttgat
gccggtaaaactacgtttagacataaaacgtttactgaatataaaggtggaaggcaaaaa
acgccgccagaactttcagaacagttcccggtgattagagagttactagatgcttatcaa
attgctcggtatgagctagagaattatgaagcagatgatattattggcacgttatcttta
atagctgaacaagatgattttgaagtaaaggtcatttcaggggacaaagacttaacacag
ctaagttcggaaaagacaacagtaggaattacgaaaaaggggattactgatatagaagag
tacacccctcagcatatcgaggaaaagtatggtatctcacctgaacgtatcattgatatg
aaagggctaatgggagatagctccgataatatcccgggtgtgccaggtgtcggggagaaa
actgcactaaaattattaaaggagtttgggacattagaacaattagttcaatcgatagat
caagtgagtggtaacaaattaaaagagaagttagaggaatttcaagaccaagctttaatg
agtaaagaattagcaacaattttaagagaagcgccgattgaagtagagctagataaaata
gcttatgaaggatggaatgaagataaactatatcatttatttaaagacctcggttttaat
tctttattagaaaagataagctttgatttagcagaagacggaacagccgagcttgaagaa
attaattttgagattgttactgattttaccgaggaacaattggatggagatagtgcatta
tatatcgaggtgttagaggataattatcattacgcagatattcttggaattgcagtcaca
aacaaaaatggaaacttctttatttcaacaaaaaacgcttgtcaatcgaatgtgtttaaa
aaatgggcagaagatgatgcctctccaaaggtcgtatatgatgcgaaaaggtctgaagtc
tcgctaagacatcatggtattcatttaaaaggtatccactttgatatccttttagcagct
tatattatcaacccttctgaaacaattgaagatttagcttctattgcgcgtaatcacgga
tactctgcagttcaatccgatcaagctttttatgggaaaggagcaaaaaggagtattcca
aaggaagaagagcttgctcctcatattgtaaggaaagcagtggcaatggattcgctttat
gaaaaattggatacgtcgctacaaacgaaccagcagtctgctcttttttacgaattagaa
ttacccttatcattgattcttgctgatatggaatcggcaggtattaaagtggatttgaaa
cgcctgcgttcaatgggaacagagctattagagaagcttgcggccattgagaatcgaatt
cacgcgtatgctggagaagcatttaatattaattctccgaaacaattaggggtaatctta
tttgataagctgcgtttaccagttatgaagaaaacaaaaacgggctattctacttcagca
gatgtattagaaaaattagaatccaaacatgagattatcaaagaaatccttgaatatcgt
caattagcgaaactacaatccacctatattgaaggtttactaaaggtggtcaataaagaa
acggataaagtgcatacccgttttaatcaagcgttaacgcaaacggggagattaagttct
acagaccctaacttacaaaatatcccgattcgcttagaagaaggtagaaagattagacaa
gcatttattccttcaaagaaagattgggttatttttgcagcagattattcacagattgaa
ttaagggttctcgctcatattgcaggtgacgaaaagctaatctccgcattcaaggaagat
ttagatatccatacgaagacagctatggaagtttttcatgtttcaaaagaagaagtgacg
gcaaatatgcggcgtcatgcaaaggcagttaactttgggattgtttacgggataagtgat
tacggcctttcacaaagtctatctatcacaagaaaagaagctggagaatttattgatcgc
tatttaacaagctaccctgcagttaaacaatatatggaagatattgtgcaagaagcaaaa
caaaaagggttcgtagaaactttacttcaccgtcgtagatatttaccggaaatcacaagt
cggaattttaatcttcgcagctttgcggaaagaacggctatgaatacacccattcaagga
agtgccgcagatattattaaaaaagcgatgatagacatggctgatcgcttagagaatgaa
caattacaatccaagcttttattacaagtgcatgatgaactgatatttgaagcaccggta
gaagaaatagaaaaactgaaagaaattgttccagatgtaatggagcatgccgtagagtta
aaagtaccgttaaaagtagattattcatacggcccaacatggtttgatgcgaagtaa
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