Lederbergia lenta: NCTC4824_01648
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Entry
NCTC4824_01648 CDS
T06924
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
blen
Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blen03016
]
NCTC4824_01648 (rimO)
Enzymes [BR:
blen01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
NCTC4824_01648 (rimO)
Transfer RNA biogenesis [BR:
blen03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NCTC4824_01648 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
SQI55894
UniProt:
A0A2X4Z5G8
LinkDB
All DBs
Position
1:1674554..1675906
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AA seq
450 aa
AA seq
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MSLVAFHTLGCKVNHYETEAIWQLFKNNGYDRVEFEARADVYVINTCTVTNTGDKKSRQV
IRRAIRSNPDAVICVTGCYAQTSPAEIMAIPGVDVVVGTQDRVKMLEYIEQFKQERQPIN
GVGNIMKNRVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIHQ
AQQLVDAGYMEIVLTGIHTGGYGEDMKDYNLAALLRDLEEQVHGLKRIRISSIEASQLTD
EVIDVIDKSNLVVRHLHIPLQSGSNTVLKRMRRKYTMEFFAERLQLLKKALPGLAVTSDV
IVGFPGETEEEFMETYNFIKEHQFSELHVFPYSKRTGTPAARMTDQVDENVKNDRVHRLI
ALSDQLAKQYASRFENEVLEVIPEEAYKENPDSGLYEGYTDNYLKVVFPATEDMVGKLVK
VKITKAGYPYNEGQFVRVMDIAQEPKSLVI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgttgcatttcatacattaggttgtaaagtgaaccattatgaaacagaagca
atatggcaattatttaagaataacggttatgatcgagtggaatttgaagctagggcggat
gtttatgtaataaatacttgtactgtcacaaatacaggtgacaagaaaagtcgtcaggtg
attcgtcgtgctatccggagtaatccggatgctgtaatatgtgtaacaggatgttacgcg
caaacatctccagcagagattatggcaattccgggggtggatgtagttgtcggcacgcaa
gatcgtgtgaaaatgctcgagtatatagagcaattcaagcaggaaagacagccgattaat
ggcgtcggcaatattatgaaaaaccgtgtgtatgaagaacttgacgttccagctttcacg
gatcgaacacgcgcctctttgaaaatccaagaaggttgcaataacttctgtacattttgt
atcattccttgggctcgaggcttaatgcgttctcgggatccgaaagaagtgattcatcaa
gctcagcaattagttgatgctggatacatggaaattgttcttactggtattcatacaggt
ggatacggggaagatatgaaggattataatttggctgcgcttctacgtgatttagaagag
caagttcatggattaaaaagaatccgtatttcgtccatcgaagcaagtcagttaacggac
gaagtaattgatgtaatcgacaaatcaaaccttgtcgttaggcatctgcatattcctctg
caatctggttctaatactgtattgaaaagaatgcgacgtaaatacacgatggaatttttc
gcggaacgtttgcaattgcttaaaaaagcattgcctgggctcgctgttacatctgatgta
attgttgggtttccaggtgagacagaagaagaatttatggaaacatacaactttattaaa
gaacatcaattttctgagttacacgtgttcccttactccaaacgaactggaacgcctgca
gcgaggatgacagatcaggtagatgagaatgttaaaaatgaccgtgtgcaccgtctgatc
gcattgtctgatcaattagcgaagcaatacgcatctcgttttgaaaatgaagtgctagaa
gttattcctgaagaagcatataaagaaaatccagatagcggtttatacgaaggttataca
gataattacctaaaagtagtttttccagcaacagaagatatggttgggaaacttgtaaaa
gtaaaaattacaaaagcaggatatccttataacgaaggtcaatttgtccgggtgatggat
atcgcacaagagccgaaatcactagttatctaa
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