Bacillus licheniformis ATCC 14580: BL01234
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Entry
BL01234 CDS
T00197
Symbol
polC
Name
(GenBank) DNA polymerase III (alpha subunit)
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bli
Bacillus licheniformis ATCC 14580
Pathway
bli03030
DNA replication
bli03430
Mismatch repair
bli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BL01234 (polC)
03430 Mismatch repair
BL01234 (polC)
03440 Homologous recombination
BL01234 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bli03032
]
BL01234 (polC)
03400 DNA repair and recombination proteins [BR:
bli03400
]
BL01234 (polC)
Enzymes [BR:
bli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BL01234 (polC)
DNA replication proteins [BR:
bli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BL01234 (polC)
DNA repair and recombination proteins [BR:
bli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BL01234 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AAU23414
UniProt:
Q65JJ0
LinkDB
All DBs
Position
1832640..1836956
Genome browser
AA seq
1438 aa
AA seq
DB search
MEDQLSVNRRQFQILLQQLNVTEDTMIRHLEGGQIIKLTVHKNKKTWHFHFKLRNVLPYQ
IFERFHSQLTRTFSHIAQVTCSIEAENPSIDEQLVQDYWTRCIQELDGISPPILALLNDQ
KPKLTGNKILLKTKTDTEASALKKKYSSLIQSSYRTFGFPELQLDTEIFVSDQEIQKFRE
QKMAEDQERALQALIEMEKQDKEAQDDEAPAGPLQIGYQIKDSEEIRTLDSIMDEERRIT
VQGYVFDAETRELKSGRTLCIFKITDYTNSILVKMFAREKEDAVLMKSLKKGMWVKARGS
IQNDTFVRDLVMIANDVNEIKAKTREDTAPEDEKRVELHLHSPMSQMDAVSSIGKLVEQA
KKWGHPAIALTDHAVVQSFPDAFAASKKHGVKMIYGLEANLVDDGVPIAYNPVHRLLEEE
TYVVFDVETTGLSAVYDTIIELAAVKVKGGEIIERFERFANPHRPLSATIIELTGITDDM
LKDAPEVEEVIRDFKEWVGDHTLVAHNASFDIGFINVAYKRLLNSEKVQNPVIDTLELGR
FLYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATGYLLVKMLKDAAEKNILYHDQLNEN
MGQSNAYQRSRPYHATLLAVNETGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLI
GSACDKGEVFEGMMQKSPEEVEDIASFYDYLEVMPPEVYRHLLQLELVRDEKALKEIIAN
ITKLGEKLNIPVVATGNVHYLNPEDKIYRKILVSSQGGANPLNRHELPNVHFRSTDEMLE
AFSFLGEEKAKEIVVKNTRMISERIEEIKPIKDDLYTPKIEGADDEIRRMSYEKARSIYG
EDLPEIVEKRIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTE
ITEVNPLPPHYVCPDCRHSEFFNDGSVGSGFDLPDKDCPKCGAAYRKDGHDIPFETFLGF
KGDKVPDIDLNFSGEYQPHAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYANDNNL
HMRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATDSEWKTTHFD
FHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQI
GCKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICEL
SEVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVPDWYIDSCKK
IKYMFPKAHAAAYVLMAVRIAYFKVHHPLLYYAAYFTVRADDFDIETMIKGSTAIRAVMD
DINSKGLDASPKEKSLLTVLELALEMCERGFSFQKVDLYRSSASEFIIDGNSLIPPFNSI
PGLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTIMEYLERHGCLESLPDQNQLSLF
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaccagctttctgtcaacagaagacagtttcaaattcttctgcagcagctgaat
gtaacggaagatacgatgatccgccaccttgaaggcggacaaatcataaagctgaccgtt
cataaaaacaagaagacatggcactttcactttaaattgagaaatgtgctgccttatcaa
atcttcgaacggtttcacagccagctgacccgcaccttttcccatatcgcccaggtcacc
tgttccatcgaggcggaaaacccttcgattgacgagcagcttgttcaggattactggacg
cgctgcattcaggaactcgatggtatttctccgccgatcttggcgcttttgaacgaccaa
aagcccaagcttacgggaaacaaaatcctgcttaaaacgaaaacagatacagaagcgtcc
gctttaaaaaagaaatacagctcgctcatccagtcaagctaccgcacattcggctttcct
gagctccagctggacacagaaatttttgtatcagatcaagagattcagaaattcagagag
caaaaaatggccgaagatcaagagagggcccttcaggctttaatcgaaatggagaagcag
gataaggaagcacaagacgatgaagcgccggcaggccctcttcagatcggctaccagatt
aaagactctgaagaaatcagaacgcttgacagcatcatggatgaagagcggagaattacg
gtgcaaggctatgtattcgacgctgaaacaagagagctgaaaagcggcagaacgctttgc
atctttaaaataaccgactatacaaacagcattcttgtcaaaatgttcgcccgcgaaaaa
gaagacgctgtattgatgaagtccctgaaaaaagggatgtgggtcaaggcgagaggaagc
atacaaaacgatacattcgtccgcgatttggtgatgatcgccaacgatgtcaatgaaatc
aaagcgaaaacccgtgaggatacagcgccagaggacgaaaaacgagtcgagctccacctc
cattcaccaatgagccagatggatgccgtatcaagcatcggcaagcttgtcgaacaggcg
aaaaaatgggggcacccggctatcgcgctcactgaccatgccgtagtccaatcgtttccg
gatgcattcgcggcaagcaaaaagcatggcgtgaaaatgatctacggacttgaagccaac
ctcgtcgacgacggcgtgccgattgcctacaatcccgtgcaccgtctgcttgaagaggaa
acatatgtcgtgttcgacgtcgagacgacggggctgtctgccgtctatgatacaatcatc
gagctggccgccgttaaagtaaaaggcggggaaatcatcgaacgctttgaaaggtttgcc
aacccgcatcgacctttatcggctacgatcatcgagctgacggggattaccgatgatatg
ctgaaagatgcgcccgaagtcgaagaggtcatccgcgattttaaagaatgggtcggtgat
cacacgcttgtcgctcacaatgcaagctttgacatcggcttcatcaatgtcgcctataag
cgcctgctgaattcggagaaagtgcagaacccggtcattgacacgcttgagctgggccgt
tttctttatccggaattcaaaaaccacaggctgaatacgctttgtaaaaagtttgacatc
gagctcacccagcatcacagggcgatttatgataccgaagcgacgggttatctccttgtg
aaaatgctgaaagatgcggccgaaaaaaatatcctgtaccacgatcagctgaatgaaaat
atggggcagtccaatgcctatcagcgttcaaggccatatcacgcgacacttttggcggtt
aatgagacaggcttgaaaaaccttttcaaacttgtttcgctgtcgcatatccattatttt
tacagggtgccgaggatcccaaggtcacagcttgaaaagtacagagaagggcttttaatc
ggttcggcgtgcgacaaaggcgaagtatttgaaggcatgatgcagaaatcgccggaagaa
gttgaagacatcgcttcattttatgactaccttgaagtcatgccgcctgaagtctaccgg
cacctgcttcagctcgaactcgtcagggatgaaaaagcgttaaaagaaatcatcgccaac
atcacaaagctcggcgagaagctgaatatcccagtagtagcaactggaaatgtccattat
ctgaaccctgaggacaaaatttaccggaagattctagtttcctcgcaaggcggcgcaaat
ccgctcaacaggcacgagctgccgaacgttcatttccgttcgacggatgaaatgcttgag
gccttttcatttttgggtgaggaaaaagcgaaagaaatcgttgtcaagaacacccgcatg
atcagcgagcgaatcgaagaaatcaagccgatcaaagacgatctttacacaccgaagatc
gaaggcgcagatgacgaaatccgccgcatgagctatgagaaagcaagaagcatttacggc
gaggacctgcccgaaatcgtcgaaaaacggatcgaaaaagagctgaaaagcataatcggc
cacggattcgccgtcatctatctgatctctcataagcttgtaaaacgctcccttgatgac
ggctatctcgtcggttcgaggggatcggtcggttcttcccttgtcgcaacattgacggaa
attaccgaggtcaacccgctgccaccgcattacgtctgtccggattgccgccattccgag
tttttcaacgacggatcggtcggttcgggatttgatttgcctgacaaagactgtccgaag
tgcggagcggcctacagaaaagacggccacgacattccgtttgagacgttcctggggttt
aaaggggacaaggttcctgatatcgacttgaacttctcgggcgaataccagccgcatgcc
cacaactatacgaaagtcctgttcggagaggataacgtctaccgtgcgggaacgatcgga
acagtcgccgaaaaaacggcttacgggtatgtcaaagggtatgcaaacgacaacaatttg
catatgcgcggggcggaaatcgaccgacttgtccaaggctgtacaggcgtcaagcggacg
acagggcagcacccgggcggaattatcgttgtgccggattatatggatatttacgacttt
tcaccaatccagtttccggcggatgccacagattccgaatggaagacgacgcattttgac
ttccattccatccatgacaaccttctgaagcttgatattctcggacacgatgatccgacg
gtcatccgtatgctccaggatcttagcgggattgatccgaaaacgattccgaccgatgat
cctgaagtgatgaaaattttccaagggacagagtctttaggggtaaccgaggaacagatc
ggctgtaaaaccggtacactcggcatccctgaattcggaacccgctttgtcagacagatg
cttgaggacaccaagccgacgacattttccgagctcgtacagatttccggcctgtcacac
ggtacggacgtatggctcggcaacgcgcaggagctgattcacaacaatatttgtgaactg
agcgaagtgatcggctgccgtgatgacattatggtgtacttaatctaccaggggcttgag
ccatccctcgcctttaagattatggagtttgtccgtaaaggaaagggactgacgcctgag
tgggaagaagaaatgaagaataataatgttccggactggtatatcgattcctgcaaaaaa
atcaaatacatgttcccgaaagcccacgctgcggcatatgttttgatggcggtcaggatc
gcttattttaaagtccatcatccgctgctctactacgcagcatacttcaccgtgcgggcc
gacgactttgacatcgaaacgatgatcaaaggatcgacagcgatcagagccgtcatggat
gatatcaactctaaaggccttgacgcttctccaaaagagaaaagtttgctcacggtgctt
gagctggcgcttgaaatgtgcgaaaggggcttctctttccaaaaagtcgatttatacaga
tcgagcgcttcagaattcatcattgatggaaacagcttgattccgccgtttaattcaata
ccggggcttggaacaaacgccgccttgaatattgtcaaagcgagggaagaaggcgaattt
ctttccaaagaagatttgcaaaaaagaggaaaggtgtcaaaaacgatcatggaatacttg
gagcgccacggctgtctcgagtcgcttccagatcagaaccagctgtcattattctag
DBGET
integrated database retrieval system
