Salinivirga cyanobacteriivorans: L21SP5_03947
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Entry
L21SP5_03947 CDS
T04172
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
blq
Salinivirga cyanobacteriivorans
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blq03009
]
L21SP5_03947 (rimO)
Enzymes [BR:
blq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L21SP5_03947 (rimO)
Ribosome biogenesis [BR:
blq03009
]
Prokaryotic type
ribosomal protein modification factors
L21SP5_03947 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Glyco_hydro_4C
Motif
Other DBs
NCBI-ProteinID:
ALO17538
UniProt:
A0A0S2I5I4
LinkDB
All DBs
Position
complement(4802097..4803392)
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AA seq
431 aa
AA seq
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MKKVNIINLGCAKNLVDSEHLARQLQANGYSVVYDHPELHDYTLINTCGFIHDAQQESID
TILEAVTLKNKHPESFVGVFGCLTQIFKEQLKKEIPEVDGWFGKYDFNAILSALQGKHYK
NYDHERVISTPSHFSYLKISEGCHRKCAFCSIPVITGNYKSVPAKELVKEAEFLAKTGVK
ELILIAQDLTYYGQDLEQDTTLVSLVQMLSKIDGIEWIRLHYAYPVGIPDDLFDEMQANP
KVCRYLDIPVQHISDNVLKAMKRGHNSQKTAQLIQNIKNKVPGIALRTTMMVGFPGETTQ
DFEQLLEFVRTEKFDRLGAFPYSHEKYTYAYDHLKDDVPEEIKEQRLEQLMEVQHEIALE
RNTAMVGQTLRVIIDRKEDSVGYGRSEFDSPEVDGEITIENGELLKVGAFYDIKITGAEA
YELFGKVTNYA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaagttaatatcataaatctgggttgtgccaaaaaccttgttgatagcgaacac
ctggcccgtcaattacaggccaatggctatagcgttgtatacgatcatccggagctgcac
gactatacattaattaacacgtgtggatttatacacgacgcccaacaagaatctattgat
accatacttgaagctgttacgctaaaaaataagcatcccgaaagctttgtaggggttttt
ggttgcttaacacaaatttttaaggaacaactcaaaaaagagatccccgaagttgatggc
tggttcggcaaatatgactttaatgccattttaagtgccttgcagggcaaacactataag
aattatgaccatgagcgggtaatctctaccccgtcccattttagctatttaaaaatttca
gaaggctgtcatcgtaaatgcgccttttgcagcattcctgtaattaccggaaactataaa
tcagtacccgccaaagaacttgtaaaagaagctgagtttcttgcaaagacaggcgttaaa
gaacttatactcattgcccaggatctgacttactatgggcaggacctggagcaagacact
acgcttgtctcattagtacaaatgctttctaaaattgatggaatcgaatggatcaggttg
cattatgcttatcctgttggcattcctgacgatttatttgatgaaatgcaagcaaatcca
aaggtttgccgctacctcgacataccggttcaacacatttcagacaatgtactcaaagca
atgaaacgtggtcataacagccaaaaaacagcacaactcattcaaaatataaaaaataag
gtacctggtattgccctgcgaaccaccatgatggtgggttttcccggagaaaccacacaa
gattttgagcaattactcgaatttgtccgcacagaaaaattcgaccggttgggtgccttt
ccctattcgcatgagaaatatacctatgcctatgatcatttaaaagatgatgtgcctgaa
gaaatcaaagaacaacgcctggaacaattgatggaggtacagcatgaaattgctcttgag
cgaaatacagcaatggttgggcaaactttacgtgtaattatcgaccggaaggaggatagt
gtgggatatggaagaagcgaatttgattctcctgaggtagatggagaaattacaattgag
aatggcgaattacttaaagttggggctttttatgacataaagattacaggtgctgaagct
tatgaactttttggaaaggtaacaaactatgcatga
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