Bombyx mandarina (wild silkworm): 114242114
Help
Entry
114242114 CDS
T05882
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
114242114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bman03400
]
114242114
Enzymes [BR:
bman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114242114
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
114242114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
114242114
NCBI-ProteinID:
XP_028028948
UniProt:
A0A6J2JI35
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MSSLQLSHHNPEFSVRIVVCDHYMTKPTAGVDVTYSEFRGTDIKQVPVLRIFGPAKDGYK
ACLHIHGVFPYFYIPCPSQNPEPQLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGL
PFYGYHDKEHLYLKVFLYSPGLIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLF
GMSDIDLQSVQFRKSGLSQKSNEVLFDTKENTLTSESSCHYEADCMASHIINRQRIGKGD
GIENPGLEEVWNQELERRKQLNMSLASKSLSQGLTSLKQVETDSHYKFENIFAVKLSNKI
DKPVLLEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLNEHEEEDLDTTI
VDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANQDQEVDVELD
DAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDGTFDNDHVTKVRKKRRR
TLQLGLSRPKKKNERVNNPTNTDSNMDTSEIDEINVSRETADGDVCISELVRASKISKTS
IENTEMKSEETIIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMG
NSSNNELELSPDGNELGIVSFYNASKMFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDY
DKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMEAKYKIPKTKQVQPFFSDYKDVG
DKVEIGQLVLKLHSNLSRDQKPFEKVLETESIENWRQLLFLQKYATQDDYKPDTLRTLLA
GNSRYVIQPVVRPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDE
INSSIVSVENCESGKPDNSFQITLNTDGSFLCFGNTDNCKDNNSCEVATVNADFLTSMVI
EVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYLDGCVFN
VPVIYISNEIEAIDEVIKLVNLHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRIT
EKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYA
QLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGS
QFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLY
PSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFV
KTSVRRGVLPALLRRILAARQAVKKSMKMQKDEAVKKAMHSRQLGLKLIANVTYGYTAAN
FSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAF
EIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETV
RRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAG
YRPGASAPPNEIAKRIAMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSL
RPHVAYYATRVLLPPLHRCLSLLGVDVFKWWNELGYNRTAQQREQTQSGGIAKYMSRERC
AVCGVRTNVRSAVCPQCAHTQRACVVLQTRANNAATYLDSCYSICSSCCGHTDTEKCQNV
ECPVLWRRSSACERYSQMTELLTHLP
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgagttcattgcagttaagtcaccataatccggagttttcagtgcgcattgtcgtatgt
gatcattatatgacgaaaccaactgcaggtgtggatgttacttattcagaattcagagga
actgacatcaaacaggtaccagttctcagaatatttggaccagcaaaagatgggtacaag
gcctgtttacatattcatggggtatttccctacttctacataccatgtccaagtcaaaat
ccagagccgcaacttttgtatcagatagcagcaagtttggataaagctttaaatatagcc
atgaaacaggcaacatcttccaatcaacatgtttacaaaatatcactagtcaaaggctta
cctttttacggataccatgataaagagcatttatatctgaaagtttttctgtacagccct
gggttaataaagcaagcagttgaactcttcagttctggggctattttaggccagacattt
caacctcacgaatcacatctaaacttcacattacaattctttatagatttcaatcttttc
ggaatgagcgacattgatttgcagagcgtacaattccgaaaatctggtctttctcaaaag
agcaatgaagtgttatttgatacaaaagaaaatactttaacgtcggaaagcagttgccat
tacgaagctgactgtatggcttctcatattattaaccgacaacgaataggtaaaggagat
ggtatagaaaatccaggattagaagaagtttggaaccaagagttggaaaggcggaaacaa
ttaaatatgtctttagcctcaaagtcactctctcaaggtcttacttctttaaaacaagta
gagacagattcacactacaaattcgaaaatatatttgccgtaaaattatcaaataaaatt
gataagcctgttcttctagagcacgcttattatccagctgagactctaggagatacgcag
ctgtttaaagcagttgatgtatcaatacatctgcctagtaaagacttagatttgacctta
aatagaacgacaaaaatgaatttaaatgaacacgaggaagaagatttggataccaccatt
gtcgatgaaaatttagtcctaaacagttccatgtctttacaatacagtcaagttttgtta
aacagtgaagatatggaattaattgatatgttgcatgatatggaccaacaacgtgttgag
gaagacagcatcatggggactccagcaaaccaagatcaagaagttgatgtcgaattagat
gatgcagaatactctaggatatttaatgatgattctgtttgtcatgatcaaaatgaaagt
gaaaataatggcagtcctttgtcttggcacgactctttctgggatggagctaatattcca
caattagacggcacattcgacaacgaccatgtcacaaaagttcggaaaaaaagaagacga
actcttcaattagggttatctaggccaaagaaaaaaaacgaaagggtaaataatccaaca
aatacagattctaatatggacactagtgaaatagacgagataaatgtttccagagaaact
gctgatggtgatgtatgtatctcagaactagtaagggctagcaaaatttcaaaaacgtca
atagaaaacactgaaatgaaatcagaagaaacaatcatagatgcagtgtctagaataacg
gctaagcaaaatattgtcaagctgatgaataaatctgaaatttatgatttacaaaacaaa
ttcgtaccaacagcaggtccctctaataaacccgttgattgtgacaacacggaaatgggt
aattcatcaaataacgaattagaattatcacctgatggtaatgaactaggtatagttagc
ttttataatgcatctaaaatgtttgacgattcttttaatcaaacatttttacaagaacag
acaaattgtgatgactgttctgatattattgcaaatgaatatgaaaaacaagaagactat
gacaaatttaaagatacggaactaaaattagatgtatcagtaaacgaaaaactagacact
ggcattaaaatttttactccaaccgtaaagccaccaactaaaaatgaaatggaagctaaa
tataaaatcccaaaaacaaaacaggttcaaccatttttttctgattataaagatgttgga
gataaagtagaaatcggccaattggttttaaaattgcacagtaatttgtcacgcgatcaa
aaaccgtttgaaaaagtattggaaactgaaagcattgaaaattggagacaactattattt
ctacaaaagtatgcaacacaagacgactacaaaccagacacgctgagaacattgttagca
ggaaattcaagatatgttatacagcctgttgtgagacctccaacgagtgagcaagtaaag
aaatggataaatgaacaaaaagctctccaactattgtcacaatttagctcagaacaagca
atttccaaaaacatggatgatttcaataattctcaagctttaggtttaaatgaagatgaa
attaacagtagtatcgtaagcgtcgaaaattgcgaaagtggaaaaccagataacagtttt
caaataacattaaatactgacggatctttcctttgctttggaaatactgataactgtaaa
gataataattcctgcgaagtagccacagtgaacgcggactttctcacttcaatggttatt
gaagtccacacttctgtgagaggtgatatgcatccagatccggcggtagatccaataaaa
gccgtgttttactctgttatcaatgactgcccgaataatcatttcctaaaaaaatcttta
acgggaatcattgtggtcgattcaagttcccgaaaatatttagatgggtgcgtattcaat
gttcctgtaatctacattagtaatgaaattgaagccatcgatgaagtaattaaattagta
aacctacatgatccagacataatgtgcggttatgaaatagaaatgaattcttggggatac
gtattggaaagagccgagattcttgggttggatgttttaaaagatttatctagaattacc
gagaagaacagacaaaaacgttggatgaaaaatgaatccgattacgaaggtagaattatt
gggagagttatattcaatgtgtggcgtttgtttcgtcacgaactggcattatcaagctac
agtttcgagaattgtatgtacgaagtattgaatgaacgagtaccgtcatacagctatgcg
caattgtcggattggtggtgcgacgaatcgaaaatgctaagatggattcccgtcgagtac
tatttgaccaaactatcgggtacagtcagaatgctacagaaattggatatcataaataga
acgtcggaactggccagattgtttggtctgcagtggtgggaagttttgtccagaggatca
cagttccgtgtcgaatctctgatgctgcgagcggccagacctctcaatcttattgctcta
tccccaactataaaacagagatctaccatgcgagcccctgaaactttgcctcttatattt
gaaccggaatctcgattctactcggatccagtgattgtcctagattttcagagtctgtat
ccttcgatgatgattgcctacaactattgcttctcaacgtgtatcggtcgcgtgcagaat
attaatggcgaaacggcctatgagttcggggcatggcgcttaaggattcctagatcaaag
ttagaagctcttgttaaaaactccctaatacattggtcgccggttgggattggatttgtt
aaaacgtcggttcggagaggcgtactgccagcgcttttgaggagaatactcgctgcaaga
caagcagttaagaaaagtatgaaaatgcagaaagatgaggcagtaaagaaagcgatgcat
tccagacaattaggtttaaaattaatagccaacgtgacatacggatatacagctgcgaac
ttcagtggacgtatgccttgcgtggaagtcgccgatagtgtggtggctaaaggcagagaa
acgcttgaaagagccataaaattagttcgggaaaatactacttggaatgccaaggttata
tacggtgacactgattcaatgttcgtgttggtgcccggcaggagtcgtttagaagcattc
gaaatcggtcagcagatagccgatgctgtgactgcagataaccctccaccagttgcactt
aaattagaaaaggtatatcaaccgtgcattctgcaaacgaaaaaacgctacgttggcttt
atgttcgagagtcccgatcaagagaaacccacgtatgaagcaaaaggaatagaaacagtc
cgaagagacggctgtcccgctggagtaaagcttctacgtcaatccttgtgtgaattattt
acccatggcgatatgtcggtggtgaaacgtctagtgaaggccacgctgtcccgtctggcg
gagacctcgctcccggtacacgaactcttctttacgcgcgaataccacggacaggctggg
tacaggcctggagcttctgcgccgccaaacgaaattgcgaaacgtatagctatgaaagac
cgtcgtgcgataccaaggacaggctggcgggtatcctggctagttacgtgcggagcgccc
ggcgtgccgctggtgcgcttggctcgtactccgcaggagctgacccgcgatcgctcgtta
cgaccccacgtggcgtactacgcgactcgcgtactcctgccgcccctacatcgctgtcta
tcgctcttgggcgttgatgtatttaaatggtggaacgagcttggctacaaccgcacagcg
caacaacgagagcagacgcagtccggtggcatcgcgaagtacatgtcccgcgagcggtgc
gcggtgtgcggcgtgcgcaccaacgtccgcagcgccgtgtgcccgcagtgtgcgcacacg
cagcgcgcctgcgtcgtgctacagacacgtgcgaacaacgctgccacctacttagactcc
tgttactcgatatgtagttcctgttgtggccacaccgacactgagaaatgtcaaaatgtg
gaatgtccagttctttggcgacgttcaagcgcatgtgaaagatattctcaaatgacggaa
ttgctaactcatttaccatga
DBGET
integrated database retrieval system
