Bombyx mandarina (wild silkworm): 114248415
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Entry
114248415 CDS
T05882
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114248415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bman03021
]
114248415
Enzymes [BR:
bman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114248415
Transcription machinery [BR:
bman03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
114248415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
114248415
NCBI-ProteinID:
XP_028037448
UniProt:
A0A6J2K751
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MSKIAMPKEQYRETYVGRKISHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGV
LDRRMGTNQKDANCETCGLGLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKV
MLPESLKKSYRRKFINPEMSYLLKKNLKAVVHKKAKTFSKCPSCEAINGMVKKSSIGILK
IVHEKYRAKKPTDPIVKKVLMDFHEAKESNKEVAAMINSGLVKEMSPLEVLNLFRRIPDE
DIPLLGMNVKLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVI
ARHLASAGKCELIQEDWDYLQLHAALYINSEMSGIPLAMQPKKPGRGLVQRLKGKQGRFR
GNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPD
VHPGANYVQQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSI
MCHRAKVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPR
NGELLIAATQDFITGGYLITQRDTFFTKSEAQQLAACLLAGPDSTMRIDMPPPAIIKPRK
LWTGKQIFSLIMRPNRRCEVKANLETKGKNYTGNKDMCVQDSYVIIRNSELVCGSMDKST
LGSGTKSSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDVTPGKKLIEAKN
KLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKACFRELHPT
NAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFV
ENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLQYDMTVRNAT
GEVVQFRYGSDGLDPTYMEGKDRPVDLARVLADVRAKCQDKNAEPLDGDGIVLAAEETLA
LDDFKTSTDEFKNELLSFLKATAGRVRALRARYAGCGRAALQLERLTLTQLVRFLRVCHH
KYQRGVIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASRNI
STPIITAELMQPYDQEFARRVKGRLEKTTLGEITTYIEEVYLPYECFLLIKLDAERIRLL
CLEVDVHSIVYSICTSKLKVKPAEVTAVSAWAIKVTGEPSKSCGWLNMSLQQLGRQLPAV
VVKGLPQVSRAVIACDDSSEKPDLPGTKYKLCVEGDGLRDVIATFGVNGTKTTSNNILEV
YHTLGIEAAKSTIISEIQAVMEGHGMSVDRRHVELLAGQMTARGEVLGITRYGLARMKES
VLNLASFEKTADHLFDAAFYGQCDRIEGVSESIIVGTPAALGTGVLQLLHKHPDPADTAT
QQELLFDRPEYHQSIWD
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattgcaatgcctaaggaacaatatagagaaacctatgtcggtcgaaaaatt
tcgcatgtaacattcaatgtagacagtccatcgctcatccagcaatctgctcacattgag
gtcatcaccaagaacttatttctccaagatggccaacgtgtgccggcacctcatggagtt
cttgacaggcgaatgggcactaatcagaaagatgccaactgtgaaacttgcggattgggt
ttggctgaatgtgtcgggcactttgggtacatacaactcacattgcccgtgttccatgtt
ggatacttccgagctatcataacgattctacagaccatatgcaaggaatgtgcgaaagtg
atgttacctgaatcactgaagaaatcataccgcaggaagttcatcaaccccgaaatgtcg
tacctgctcaagaaaaacctcaaggcagtagtccacaagaaagcgaagaccttcagcaag
tgtccgtcgtgtgaggccattaacggcatggttaaaaaaagttcaattggcatattaaaa
atagtgcatgaaaagtacagagctaagaaaccaacagatccaattgtaaagaaggtttta
atggattttcatgaagcgaaggagtccaataaggaggttgcggccatgatcaacagcgga
cttgttaaggaaatgagtcctttagaggtactgaatttatttcgacgtatcccagacgag
gacattcccctcctcgggatgaacgtgaagctctctcgtcctgaggacctgatcctgacc
cgactgccggtgccgccgctctgcatccgacctagcgtcgtctccgacatcaaggctgga
accaacgaagacgacctgacaatgaagcagtctgagatactgctgatcaacgacgtgata
gcgcggcatttggccagcgccggcaagtgcgagctcatacaggaggactgggactacttg
cagctgcacgcggccctctacatcaacagcgagatgtccgggataccgctcgcgatgcag
cccaaaaaaccgggccggggcttagtgcagcggctcaagggcaagcagggccggttcagg
ggcaacttgtccgggaaacgagtggatttctcgagcagaactgtcatctcgccggacccg
aacctgcagatacaagaggtgggggtcccggtgcacgtggccaagatcctgacgtacccc
gagcgcgttttccccgcgaacctgcagtggctgcggcggctcgtatgcaacggtcccgat
gtccatcccggagccaactacgtccagcagcgaggcctgaagaccaaaaagtacctcaag
tacggaaacagggagaagatcgcgcaagaacttaagtgcggcgacgtggtggagcggcac
ctggtggacggtgatgtggtgctgttcaacaggcagccgtccctgcacaagctgtccatc
atgtgccaccgagccaaggtgcagccgcagaggactttcaggtttaacgaatgtgtgtgc
acgccttacaacgctgacttcgacggagacgagatgaacatgcacctgccgcaaactgag
gaggcgagggccgaagctctcatacttatggggaacaaatcgaacctggtgactcctcgg
aacggggagctcctgatagcggccacgcaagacttcatcaccggcgggtacctcatcacc
cagagggacacgttcttcacgaagagcgaggctcagcagctggcggcttgtctcctggcc
ggccccgactccaccatgaggatagacatgccgccccccgccatcatcaaaccgcggaag
ctctggaccgggaagcagatcttcagtttgatcatgaggcccaaccgacgctgcgaagtc
aaggccaatctagaaactaaagggaagaactacacagggaacaaggatatgtgcgtgcaa
gactcttacgtgataattaggaactctgagctggtctgcgggtccatggacaagagcacc
cttggctctggcaccaagagcagcatcttctacattctactgagggactggggcgaggag
tatgcagtccgaggaatgtggaggttggctagaatggcgtcttactacatgatgaatcgt
ggcttcagtttcggtataatagacgtgacgccgggcaagaagctcatagaggctaaaaac
aaacttctggagtccgggtactctaaatgcgacggctacatcctggagatggagaagggc
acgctgcagtgccagccgggatgtaccatggaggaaaccctggaggccgtcatgctaagc
gagctcagcagcataagagagctagcagcgaaggcttgcttccgggagctgcatcctacc
aacgcgcccctgatcatggcgcagagtggctccaaaggttccaacatcaacatatcgcag
atgatcgcgtgcgtgggccagcaggcgcttaacggcaaacgggtaccgaacggattcgaa
gaccggtccctgccgcacttcgagagacactcaaagatcccggctgctcgcggcttcgtg
gagaacagtttctacaccggcctgacgccgaccgagtttttcttccacaccatgggaggg
cgcgaggggctcgtggacaccgctgtgaagaccgcagagaccggctacctgcagaggcga
cttgtcaagtcgctggaggacctggtgctgcagtacgacatgactgtccggaacgcgacc
ggcgaggtggtgcagttccggtacggcagcgacggcctcgaccccacctacatggagggc
aaggaccgccccgtggacctggccagggtgctggcggacgtcagagccaagtgccaggat
aaaaacgcagaaccattagacggtgacggaatcgtgctggccgccgaagaaaccctagcc
ctggacgacttcaaaacctccacggacgagttcaagaacgaactactctcgttcctgaag
gcgacggcgggccgggtccgcgcgctgcgggctcggtacgcgggctgcgggcgcgcggcg
ctgcagctggagcgcctgacgctgacgcagctggtgcgcttcctgcgcgtgtgccaccac
aagtaccagcgcggggtcatcgagcccggcacggcggtgggcgccctcgccgcgcagagt
atcggcgagcccggcacccagatgaccctgaagacgttccatttcgccggtgtcgcgtcc
atgaacataacccagggggttccccgcgtcaaggagatcatcaacgcctcccggaatatc
tccactccgatcatcaccgccgagctcatgcagccctacgaccaagagttcgccaggagg
gtcaaggggaggctggagaagaccacccttggcgagataacgacgtacatagaggaagtg
tacctgccctacgagtgtttcctgctcatcaagctggacgcggagaggataaggctgctc
tgtctggaggtcgacgtccattccatcgtgtattcgatctgcacgtcgaagctgaaggtg
aagccggcggaggtgacggcggtgtcggcctgggccatcaaggtgacgggcgagccgtcc
aagagctgcggctggctgaacatgtcgctgcagcagctgggccggcagctgcccgccgtg
gtggtgaagggcctgccgcaggtgtcgcgcgccgtcatcgcctgcgacgactcctcggag
aagccggacctgcccggcaccaagtacaagctgtgcgtggagggggacggcctgagggac
gtcatcgccaccttcggagtcaacggcacgaagaccacatccaataacattttagaggtg
taccatacgttggggatagaagccgcgaaatctaccatcatcagtgagatccaggccgtg
atggaaggtcacggaatgagcgtggacaggaggcacgtggagctgctggcggggcagatg
acggcgcggggtgaggtgctgggcatcaccagatacggactcgccaggatgaaggaatcc
gttttgaatttggccagtttcgagaagacagctgatcatctgttcgacgcggcgttctac
gggcagtgcgaccggatcgagggcgtgtccgagtccatcatcgtgggcacccccgccgcg
ctgggcaccggcgtgctgcagctgctgcacaagcaccccgaccccgcggacaccgccacg
cagcaggagttgctgttcgacagaccggagtaccaccagtccatatgggactga
DBGET
integrated database retrieval system
