Bombyx mandarina (wild silkworm): 114249524
Help
Entry
114249524 CDS
T05882
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114249524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bman03400
]
114249524
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114249524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
114249524
NCBI-ProteinID:
XP_028038931
UniProt:
A0A6J2K9G5
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MSKRNSTGAANTLFNYFTKTPPTNKKLKANATEDTDCNGSPKSSKKGIHLENKKRERQIT
PSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNKIGSTKKEEDEAKSEKK
KESIVEKKLQDSFKYEPNQTPKSNKNTKTTAGSKSKAMLPEENPKSQEEESSDGNWVHCK
LDWLKPDKIRDAMKRKPDHPDYNPRTLYVPPDFLKSQTPAHQQWWIMKSTNFDCVLFFKV
GKFYELYHMDAAVGVNELGFSYMKGDFAHSGFPESAYGRMASTLVSKGYKIARVEQTETP
EMTQERCRKSGQSSKLDKVVRREVCQVAVRGAEGCGPNDAPRAAALAAYMLAVAEQAHND
SSTYGVCFIDTSIGLFHLGQFEDDKHSSRLLTTLAHYPPALIIYDRKATTARTSKLLSTH
WHDARREPRTLGPPDATLKTLAEKYYRTNEDGDWPEGIKEFLHQGDSLGLTPAPNCELAI
KALGGCVSYLTECLLDIQILGMSQFTSYAPPDVLNRKLSERHKVDNCWEGGNTLVLDAIT
LRNLRIVQDEGCLYDRLNFCSTAMGKRLLYQWVCSPSANINVIKERQEAVKCLFDNQELC
QNAKNVLTSLPDLERLLAKVHTLGNLKRSKQHPDSRAIFYEEKTYSKRKVLEFISVLNGF
TSALTLAESFSDVDSVLLKRITQVEGGNYPDYRDTLKFFKEAFNQQEAEKEGCIKPGAGV
DREYDGALRRIQEIESELKEYLAEQEKHFRCRLSYVGTDKKRYQIEVPQSACSRAGSVYH
MESARKGFKRFSTSETKEFLSRMMAAEEQKTNVLKDLSRRMYEKFSSHYAQWEAAVHCLA
SLDVLLAFAEFARQQHGDICLPDVTFDPGTKPYINIVEGRHPCISLVNEFIPNDTRLGGA
GPGLLLLSGPNMGGKSTLMRQLGLLAVLAHLGSYVPARECGLSLVDRVFTRLGASDDILA
GQSTFLVEMNETAAIVRHATVHSLVLLDELGRGTSTYDGTAIASGVCAALAGRGCRAVFS
THYHSLVRHLAAHDGLVLGHMACMVETDESVPDSEDHIPEETITFLYKLSPGACPKSYGF
NAARLAGIPKEITRRAHEISKKLEKEAMCARAFRDIMKMENNAGGVRELLATLTI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgaaacagcacaggggcagccaatactcttttcaactattttactaaaaca
ccgccaacgaataaaaaattaaaagcgaacgctactgaagataccgattgtaatggttcc
ccgaaaagcagtaaaaaaggaatacatctcgaaaataaaaaacgcgaaaggcaaattaca
ccctcaccggagcttaaaaaggcttcgagtgatgaagaagaagttatttcattgccaact
aagagaaaaagaataagattaaatccagtcgattctgatgattctgatgttgaaaataaa
gcagacaataaaattggatcaaccaagaaagaagaagatgaagcaaagagtgagaaaaag
aaagaaagtatagtagaaaagaaacttcaagacagttttaaatatgaaccaaatcaaacc
ccaaaaagtaacaagaatactaaaactacagctggatcaaaatcaaaagcaatgttacct
gaagaaaacccaaagagtcaggaagaagagtcatcagatggtaattgggtgcactgcaag
ttagactggttgaagccagacaagatcagagatgcgatgaagaggaaaccggaccatcca
gattataatccgaggactctgtatgttccaccggatttcttaaaaagtcagacacctgct
catcaacaatggtggataatgaaatcaaccaattttgattgtgtattgttcttcaaagtt
ggtaaattctatgaattgtatcacatggatgctgctgttggggtcaatgaacttggattc
tcctacatgaaaggtgatttcgcacactctggcttccctgaaagcgcctacggacgtatg
gcttcgactctagtatcgaaaggttacaaaatagcacgcgtggaacaaaccgaaacgcct
gaaatgacacaggaaaggtgtagaaaaagcggacagagcagtaagctggacaaggtggtc
cggcgcgaggtgtgccaggtggcggtgcgcggcgccgagggctgcgggcccaacgacgcg
ccgcgcgccgccgcactcgccgcctacatgctcgcggtggctgaacaggcacataatgat
tcaagcacttatggagtttgtttcatagacacttcaataggattgttccaccttggacag
ttcgaagacgacaagcactcatcgagacttctcaccacactggcgcactacccaccagcc
ttgataatatacgaccgtaaagcgacaacggcccgcacgagcaagctgctgtccacgcac
tggcacgacgcgcgcagggagccccggaccctggggcctcccgatgccacgctcaaaacc
ttagccgagaaatactacaggacgaatgaggacggagactggccagaaggtatcaaggag
ttcttacatcaaggtgattccctgggcctgacaccggctcccaactgtgaactcgccatt
aaagctctcggaggatgcgtttcttatttgaccgagtgtttattggacatacaaatacta
ggaatgtcgcagttcacatcgtacgctccacccgatgtactaaataggaagctatctgaa
aggcacaaggtcgataattgttgggagggcggtaacactttggtgctggacgcaataacg
ctgaggaatttacggatagtacaagacgaaggctgtctgtacgatagattgaatttttgt
tcaacggctatgggaaaaaggttgctctatcaatgggtttgttcgccgagcgccaatata
aacgtaataaaagaaaggcaagaagctgtcaaatgtttgtttgacaatcaggaactatgt
caaaatgcaaagaacgttttgacatcattacccgatttagaacgtctgttagctaaagta
cacaccctaggaaacttgaagcgttcaaagcagcatccggattctagagcaatattctac
gaagagaagacatattcaaagcggaaggttctagagttcatctctgtgctgaacggcttc
acctcagcactgactcttgccgagagcttcagtgatgtggactcggtgttattaaaaaga
atcacacaagtcgaaggtggcaattatccggattacagggacactttgaaatttttcaag
gaggccttcaatcaacaagaggccgagaaggaaggctgcatcaaaccgggcgcgggcgtc
gacagagagtacgacggagccctgcgacgaatacaggagatagagagtgagctcaaggag
tatttagccgagcaagagaaacacttccgctgtagattgtcatatgtgggtacggacaaa
aagcgttaccagatcgaagtgccgcagagcgcctgttcccgcgccggctcggtctaccac
atggagagcgctcgcaaaggcttcaagaggttttctaccagcgagacgaaggagttcctg
tcccgcatgatggccgccgaggagcaaaagacgaacgtgcttaaggacttgagccgcaga
atgtacgagaagttctcgtcccactacgcgcagtgggaggcggccgtgcactgcctcgcc
agcctcgacgtgctgctggcgttcgcagagtttgcacgacaacagcacggcgatatctgt
ctacccgatgtcacttttgatccagggacaaagccctacataaacatcgtggaggggcgc
cacccctgcatatcgctggtgaacgagttcataccgaacgacacgaggctgggcggcgcc
gggcccggcctgctgctgctctccgggcccaacatgggcggcaagtccacgctcatgagg
cagctcggcctgctcgccgtcctcgcgcacctgggtagctacgtgccggcgcgggagtgc
ggcctcagcctcgtggaccgcgtgttcacgcgcctcggagcctccgacgacatcctcgcc
ggacagtccacgttcctggtggagatgaacgagaccgcagccatcgtcaggcacgccacc
gtacattcgctggtcttgttagacgaattgggtcgaggcacgtccacgtacgacgggacc
gccatagcgtccggcgtgtgcgcggcgctggcggggcgcggctgccgggccgtgttctcg
acgcactaccactcgctcgtgcgacacctggcggcgcacgatggactcgtgctcgggcac
atggcgtgcatggttgaaaccgacgaatcggtccccgatagcgaagatcacataccggag
gagactatcacgttcctatacaagctgagtccgggtgcttgtcctaagtcctacggtttc
aatgcggcccgcctcgctggaatacccaaagaaatcacccgcagagctcacgagatatcc
aagaaactggaaaaggaagccatgtgcgcacgagcctttagggatatcatgaaaatggaa
aacaatgccggtggcgttagagagttgctggcaacactgacgatttga
DBGET
integrated database retrieval system
