Bombyx mandarina (wild silkworm): 114251432
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Entry
114251432 CDS
T05882
Name
(RefSeq) serine/threonine-protein kinase SMG1
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114251432
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bman01001
]
114251432
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114251432
Enzymes [BR:
bman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114251432
Protein kinases [BR:
bman01001
]
Serine/threonine kinases: Other
PIKK family [OT]
114251432
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114251432
mRNA cycle factors
Common to processing body (P body) and stress granule
114251432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMG1
PI3_PI4_kinase
FRB_dom
HEAT
Motif
Other DBs
NCBI-GeneID:
114251432
NCBI-ProteinID:
XP_028041487
UniProt:
A0A6J2KKL8
LinkDB
All DBs
Position
Unknown
AA seq
2260 aa
AA seq
DB search
MLSATTSNKVKNLKGTETSITLERDDSAHENSTDDKIRGYVNAYDSLPGFEGSSRDGRFR
PRGRVTEFRPSRGGRGGSRGRGGFPPRGERDPFDNSYKYHEPLNQPVGDSWSQGNNDSTF
YERSDLVLNLPEDPRISKLLRRLCAESDVEKSLAICRKLQDAVMMPENTRYIRRSYEILV
ESLLDVLYDGPGPETKEGAAAVLGRIGYVMGPDFRKHLDWIVATYSVHNNSIKHLLTLSL
IETYQLDYQNHDLSEFAEQTLDRLQVIIEGTDSADVFMAAINAMLVMSNSYPVQFANHFV
DTVDILVGWHVDNAQPNKIKQFALQSLFKLSRHWQADVGFSVNLLNHFVEDLTVHSLDLE
SGKSEGDDIQKITSFLNVFNTVVKSLGNLLSPTVSHTVTWVFLTETFTKILEVLKKSLKD
DVESDLILAGNECISLLLKYLQSKSISCALGLYPLIYMEMEKYLQFDENVCLSVINLVST
TIKEIASNLPIEFIGQTIGPGSLLRPLRYSESILILNSILSVYSNLLNLKNIPLLQETYK
FVLTDIQNAYSVILPEISIIKAEYFEEIKEEHAEKNVIFYLQCLSELANASNSIIGMWAL
QPSILELLAIKMCPHSEILGGYKPALQYSILYLLYSHCKKNNHFIASSDLMSNTQQRASD
IFGLANLSLGDVSSSSPTSGHLAVILNTISTILVEDVPKETLVLVLSWISDIFCQLEKYL
PIVSLCNGFLVLVTNMLTLVHCFDDDVVLLIMNNCHHLLKNKSLTWNLILLKKIAVLCLL
HIDNFNKNLADVCKQVLFDLPWDIVQLELDKQVVKVFTSRKMSLNILNCDTKFNSFKEYL
MRGTYCTLSQQHFQPIMNSLLVSVPVEKTFILDSFLSTWPLQNGDTDDKNQLFFRQCAMT
FDSVCVSWALSEVAQTCVSVKLRTVLGKPQETFMKIEGALKTMAREVSLTDTKYTSKNSN
DLISTIKMEQMRSSWITEFMIFLEKYIYNAAEGTATVLPAVSKPVKTFFHTNWSTCREWL
TRVRPAALAVSLHAGHFGAAIYHASLMLQAAANSKTNIDIEAITMTIARALIKIEEPEVL
HGFYVWIKKTFDKKLVWLKGAAEQANSRHELALGFFKKLKNIKPNDAQQETMITSLYNDS
RCLKFIDEQIIESYKHIQSWEEIEEWKDIDQQNPNSQWYCLSALKMFEEDAQIPEKLCNW
NVLELESNEISKNSCSYQALLNKIESTLICTAANVYYNDYNEKYETLLKNCQELLNSATE
EFTRSNSIHFLKEIAVLQLANHGLMNVVKNGKVLTNPFKPSSVKEHKYVTELKNLSRVVW
WNQYFTDLNVTEENVFFTESLRLDLIKSARKNANIMMAKRELLKHFKNNSAFQLYLGEVE
NLEELSEVLLMSTNSYNLDIWTPNNACALTELCKLAYAKEDTKMPAINLCASISFGFSQR
LAMGEQSYELRERGTRMLLTLSKWVQSETENVLDVDSPLSKLVSALPEIGLVDNNVSENV
IPLTDSAVGKLLQFGVNQCPGLAKAWANFAAWCFRWGRKMVEFSSKTREQLTENDKLQIE
SVMIGCSPEDFEAVCEILSKTKATCDDEDIDWNEINTSEMIESQLRTVPSLSNAFPEHLA
LLVDIWRQAQKRVFSYFELSADAYFKFLQLICASDYINHSGENAVVTATLRLLRLIVKHA
MELQTVLESGLANTPTQPWKVIIPQLFSRLNHPETYVRKCVSDLLCRLAEDTPHLITFPA
VVGAVENEQSELPELNFARSLLSNDAESCEDNLDLHDAASDKVVNNELNSCFLDMVETLA
NQAPTTILQVKLLVKELQRINLLWDELCLGTLVQHHSDFTKRLAQLETEVTIVKNNENLS
AEDKEKLIKEKHRIIFEPIVFVLEQLQHVTSAKPETPHEVAFQAKFQSLIVDVIDKLKNP
TNPEKPQESWAPFKQLQIKLQQKVNKRTSYILRMSDISPVLAEMKNTVITMPGVHTNQRT
VRVTIRSVENNVAILPTKTRPKKLVFYGSDGKSYTYLFKGLEDLHLDERIMQLLSITNTM
LARDSENNNNQTYRARHYSVIPLGPRSGLISWVDNVTPLFALYKRWQNREAAVISTKTNK
TVNVLRPSELFYNKLNPLLKEAGISTDNRKEWPVTILKQVLQELTAETPRDLLWRELWCG
SVTPEQWWQMTRRYSYSVAVMSTIGYIIGLGDRHLDNVLVDLTSGEVVHIDYNVCFEKGK
TLRVPEKVPFRLTPNLVAALGVTGVEVSVLIISHSIKKIT
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atgctatccgcaacaacaagtaacaaagtcaaaaacctaaaaggaacggaaacttcgata
actttagaacgggatgatagtgcgcacgaaaactcaacggatgataagatcagaggttat
gttaatgcctacgattccctgcctggtttcgagggatcctccagggatggacgttttcga
ccccggggccgggttactgaatttcggccgtcacgtggcggtcgaggcggcagtcgcggt
cgaggcggtttcccgccccgcggcgaacgggatcccttcgataattcctataaatatcac
gaaccgttaaatcagcccgtgggcgactcctggtctcaaggaaataacgacagcacattt
tatgagcgatcagatttagttttgaatttgccagaagatccacgcatctcaaaactgcta
cggcgtctttgtgctgaaagtgacgtcgaaaagtcgctcgccatatgtagaaaacttcaa
gacgctgtgatgatgccagaaaacacacgatacatacgaaggtcttacgaaattttggtg
gaatcactgttggatgtgctttatgatggccccggtcctgaaacaaaggaaggcgctgct
gcagtgctcggaagaataggatatgtaatgggtccggactttagaaaacatcttgattgg
atagtagctacttactctgtccataacaactcaatcaaacacttgttgacattgtcttta
attgaaacataccaattggattatcaaaatcatgacttgtctgaatttgcagaacaaact
cttgacagactacaagtaataatcgagggtacagactcagctgatgtgttcatggctgcc
attaatgctatgttagtcatgtctaattcatatccagtgcaatttgccaatcactttgta
gacactgtagacatattggttggttggcatgtagacaatgcccaaccaaataaaattaaa
caatttgctttacagtcattgtttaaattgagtaggcattggcaagctgatgtgggattc
tctgtcaatttattgaatcattttgtcgaagatttgactgttcactctcttgatctggag
tctggaaaaagtgaaggagatgacatacaaaaaattacatcttttttgaatgttttcaac
acagtcgtcaagagcttaggaaatcttttaagccctacggtctcacatactgtcacatgg
gtgtttttaacagaaacattcacaaaaatactagaggttttaaagaaatcactcaaggat
gatgtggaatctgatttaatattagctggtaatgaatgcatttcgttgctcctgaaatat
ctgcagtctaaatcaatatcttgtgctttaggtttgtaccccttgatttatatggagatg
gaaaaatacctgcaatttgatgagaatgtatgcctcagtgtaattaatttagtgtcaaca
acaattaaggaaatcgcatctaacctccccatcgaatttattggacaaacaataggtcca
gggtcactactgagaccacttcgttactctgagagtatactgatattgaacagcattttg
tcagtttacagtaatttgttaaacttgaagaatattcctctactgcaagagacctacaaa
tttgtgttgactgacatccagaatgcatattcggtcattttacctgaaatatcaattata
aaagcagaatattttgaagaaattaaagaagaacatgcagagaaaaatgtaatattttat
cttcaatgtttgtctgagcttgcaaatgcgagtaattctataattggcatgtgggcactt
caaccaagcatcctggaactgctagccataaaaatgtgtccgcatagtgaaatattaggt
ggctacaaaccagctctacaatattcaatactgtaccttttgtactcacattgcaagaaa
aataatcacttcatagcttcaagtgatttaatgagcaatacccaacagagagctagtgat
atatttggtttagccaatctgagtttaggagatgtttcaagctcaagtccaacatctggt
catcttgctgtgattttgaatacaatcagtacgattcttgttgaagatgtaccaaaagaa
actttggtacttgtattgagttggatatctgatattttttgccagctggagaaatatttg
ccaattgtgagcttgtgtaatggctttctagttttggtaacaaacatgttgaccttagtt
cactgctttgatgatgatgttgtattactaatcatgaataattgccaccatttactgaag
aataaaagtttgacttggaatctcattttgttaaaaaaaatagcagtattatgtttgctg
catattgacaattttaataagaacctggctgatgtctgcaagcaagtactgtttgatcta
ccttgggatatcgtgcaattggaattagacaagcaagtggtaaaagtattcacaagtcgt
aaaatgagtttgaatattttgaattgtgacacgaaattcaactccttcaaagagtaccta
atgagaggaacatattgtactttgtcacaacaacactttcaaccgataatgaattcacta
ttagtatctgtaccagtggaaaaaacctttatacttgattcatttctatccacttggcct
ttacaaaatggagatacagatgacaaaaaccagctcttcttcagacagtgtgcaatgact
tttgattctgtttgtgttagctgggcactctctgaggtcgcacaaacatgtgtctcagta
aaattaagaacagtcctgggaaagccacaagagaccttcatgaaaatagaaggtgcctta
aaaacaatggcaagagaagtttcattaacggacacaaaatacacaagtaaaaatagtaat
gacttaatatccaccataaaaatggagcaaatgaggtcttcatggattactgagtttatg
atattcttggagaaatatatttacaatgcagctgaaggtacagctacagtattaccagca
gttagcaaaccagtgaaaacattttttcacactaattggtctacttgtagagaatggtta
acaagagtgcgccctgccgcactggctgtaagtctgcatgcaggacattttggtgctgcg
atatatcacgcctctttgatgttacaagctgcagcgaattctaaaactaatattgacatt
gaagccataacaatgactatagcacgtgcccttattaaaattgaagaaccggaagtttta
cacggcttttatgtttggattaaaaagacgtttgacaagaaacttgtttggctaaaaggt
gctgcagaacaagccaactcgagacatgaattagcattaggcttcttcaagaaattaaag
aatatcaagccgaatgatgctcaacaagagactatgatcacttcactatacaatgactct
agatgtcttaaattcatagatgaacagattatagaaagctacaagcatattcaaagctgg
gaagaaatagaagaatggaaggatattgaccaacaaaatccaaattcacaatggtactgt
ttatctgctctaaagatgttcgaagaggatgcgcaaattcctgaaaaactctgtaattgg
aatgtattggaactcgaaagtaatgaaatatctaaaaacagctgttcataccaagcattg
ttgaataagatagaatcaactctcatttgcacagcagcgaatgtttattacaatgattac
aatgaaaaatatgaaactttattgaaaaattgtcaagaactactaaattcagccacagaa
gagttcaccagaagtaattccatacattttttgaaggaaatagctgtactacaactagca
aaccacggattgatgaatgtcgttaaaaatgggaaagttttaacaaaccctttcaaacca
tctagcgtgaaagaacataaatatgtgactgaattgaaaaacctcagcagagtagtgtgg
tggaatcaatactttacagatttgaatgtgacggaagaaaatgttttcttcactgaaagt
cttcgactagaccttattaagagtgcgagaaaaaacgctaacatcatgatggctaaaagg
gaacttctaaaacattttaaaaataactctgcattccagttgtatctgggtgaagtcgag
aatttggaagaattgagtgaagttttgcttatgtctacaaattcatacaatttagatatt
tggactcctaataatgcttgtgctttgaccgaactctgtaaattggcgtatgcaaaagaa
gatacgaaaatgccagcaattaatttgtgtgctagtatttcgtttggattttctcaaaga
ctagcaatgggtgaacagagttatgagcttcgtgaaaggggcactaggatgctcttgact
ctttctaaatgggttcagagtgaaacagaaaatgttttagacgttgattcgccattatca
aaactagtatcagctttgcctgaaattggcttagtggataataatgtttccgagaatgta
attccgctaacggactctgctgttggtaaattattgcaatttggagtcaatcagtgccca
ggattggccaaagcgtgggcaaattttgcagcttggtgctttagatggggtaggaaaatg
gtcgaattcagttccaaaacgagggaacaattgactgaaaatgacaaactgcaaatcgaa
agcgttatgattggatgttctcctgaagattttgaagctgtttgcgagattctttctaag
actaaagctacatgtgatgacgaagacatagattggaatgagattaacacatcggaaatg
attgaaagtcagttaaggaccgtgccgtcgctcagtaatgctttccccgaacatttggcg
ctcctagtcgacatatggcgacaagcccagaaacgagtgttttcgtacttcgaattatcg
gcagatgcatatttcaagttccttcaattgatatgcgcttctgactacataaaccacagt
ggggaaaatgctgtggtcactgctactttgagactgctacgtttgatagtgaaacatgcc
atggaattgcagactgttttagaatctggattggccaatacgcctacacaaccgtggaaa
gtaataattccacaactattttcaagactaaatcaccctgagacatacgtaaggaagtgt
gtttcagatttgctttgtagacttgcggaagacactcctcatttgatcacctttccagcc
gtcgttggtgcagtggaaaacgagcaatctgaattgcctgagttgaattttgctagatct
ttactctcgaacgatgccgaaagctgtgaagataatcttgacctccatgatgctgctagc
gataaagtggtcaacaacgagttgaattcatgctttctagacatggttgagactttagcg
aatcaggctcccacaactatactccaagtaaaactactggtcaaagagttgcaaagaatc
aacttactatgggatgaactctgcttaggaactctggttcaacatcactccgattttact
aagaggctagcgcagttggaaactgaagtaacaatagtgaagaataacgaaaatctatct
gcagaagacaaagaaaaattaataaaagaaaaacatcgcattatattcgaacctatagtt
tttgttcttgaacaacttcagcacgtgacgtcagcaaagcctgagacaccacacgaggtt
gcgttccaggcaaaatttcagtctctaattgttgatgtgatcgacaagttaaagaatcct
acgaatcctgaaaaaccacaagaatcgtgggctccgtttaagcagttacaaatcaaactc
caacagaaagttaataagagaacttcttatatactgaggatgtccgatattagtccagtt
ctcgctgaaatgaaaaacacggttatcactatgcccggtgtgcacacaaatcaaagaacg
gtcagagtgactataagatctgtagaaaataacgttgctattctgccaaccaagacaagg
cctaaaaagttagtgttttacggttccgatggaaaatcctacacgtacttgttcaaaggt
ttggaagatttacatttagatgagagaattatgcaactgctatcgataaccaatacaatg
ttggcgcgagattccgaaaacaacaacaatcaaacgtaccgagcgaggcattattccgta
attcctctgggacccaggtctggtctcattagttgggtagataatgtaacaccacttttt
gccctgtacaaacgttggcagaatcgtgaagccgccgttatatcaaccaaaacgaacaag
actgtcaacgttttgcgtccatcagaactattttacaacaaactgaatccgttgttaaaa
gaagcgggtatttctaccgacaacagaaaggagtggcccgtgacgatactgaagcaagta
ctgcaggagttaacagcagaaactccccgtgatctactgtggagagagttgtggtgtggt
agcgtgacgccggaacagtggtggcagatgactcgccggtacagttactctgttgccgtg
atgagcactatcggatacataatagggttaggtgatagacatttggacaatgtgttggtg
gacttaacgtccggtgaagtggtgcatatagactataacgtgtgcttcgagaaaggcaag
actctccgtgtgccggagaaggtacccttccggctgacgcccaacttggtcgcagctctt
ggagtgactggagtcgaggtgagtgttttgattatatcacattcaattaaaaaaataact
taa
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integrated database retrieval system
