Bermanella marisrubri: HF888_07980
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Entry
HF888_07980 CDS
T06527
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00730
Thiamine metabolism
bmar01100
Metabolic pathways
bmar01240
Biosynthesis of cofactors
bmar04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HF888_07980 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HF888_07980 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmar03016
]
HF888_07980 (thiI)
Enzymes [BR:
bmar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
HF888_07980 (thiI)
Transfer RNA biogenesis [BR:
bmar03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HF888_07980 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QIZ84169
LinkDB
All DBs
Position
complement(1742565..1744016)
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AA seq
483 aa
AA seq
DB search
MKFVVKLFPEITIKSKPVRKQLISQLRRNIQRTLTHHGIDVKVQGQWDNIELHIEDDNLE
QGARDLLVKIPGIEKVQTVKEFNFQTFDDIFQIAMEQFADKLTDKTFCVRVKRTGDHDFN
STDVERYVGGGLLKHTDAKNVQLKKPDVTVKLDIRKQRLHTITQEDKGLGGFPIGCQDSV
LSLVSGGFDSNVASYLMMRRGMQTHYLFFNLGGSAHEIGVKQVAHYLWENYSVSHGVKFI
TIPFEGVVSEILERIDNSYMGVVLKRMMLRAGSQIAESMGIDALVTGESIAQVSSQTLKN
LKVIDGVTETLVLRPLITMDKPEIINISREIDTYDFAANMPEYCGVISRKPTTRAKIEKV
IHEEARFNFEVLDKAVYDAKFERIQNVLVGQKGVTDVELISVPGSDDIIVDIRHPQEEEQ
QPLHLTNNEIVKIPFYKLAQQAHDLPHDKTLLLYCSKGTMSQLHAEHLIQQGFENIKVFK
PNK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttgtaaaactattcccagaaatcaccattaaatccaagccagtgcgtaag
caactgatttctcagttgcgccgaaatattcaacgcacactcacccatcatggtattgac
gttaaagtacaaggccagtgggataacattgagcttcatattgaagacgacaacctagag
caaggtgcacgagatcttctggtaaaaatcccaggcatcgaaaaagtacaaacggttaaa
gaatttaacttccaaacgtttgatgacatttttcaaatcgcaatggaacagtttgctgac
aagctaacggataagacattctgtgttcgtgtgaaaagaactggcgatcacgactttaac
tctaccgatgtagaacgctacgtcggtggcggtttactaaagcataccgacgctaaaaac
gtacaacttaaaaagcctgacgtaacggttaagctggacattcgcaaacaacgcctgcat
accatcacccaagaagataaaggcttaggtggtttccccattggctgtcaggactctgta
ctttcattagtttctggcggttttgattcaaacgtggccagctacttgatgatgcgccgc
ggcatgcaaacccattatctattttttaatttaggcggctcagctcacgaaattggcgtc
aagcaagtagcgcactatttatgggaaaactacagtgttagtcatggcgttaaatttatc
accattccatttgaaggcgttgtaagcgaaatcttagaacgcattgataatagctatatg
ggcgttgtcctcaagcgtatgatgctacgcgcaggcagccaaattgctgagtccatgggc
attgatgctctagttactggcgagagcattgctcaggtctccagtcagaccctgaaaaac
ctcaaagtgatcgatggtgtcaccgaaacacttgtattgcgcccattgatcaccatggac
aaacctgagattatcaacattagccgcgaaattgatacctatgactttgctgccaatatg
ccagagtattgcggtgtcatttctcgcaagccaaccacacgtgcaaaaatcgaaaaagtg
atacacgaggaagcacgttttaatttcgaagtattggataaagccgtctacgatgctaag
ttcgagcgtattcaaaacgtattagtgggacaaaaaggtgttactgatgtggaattgatt
tcagtgcccggctccgatgatatcatcgttgatatcagacacccacaggaagaagagcaa
caaccacttcatctaaccaataatgaaatagtgaaaatacccttctacaaactggctcag
caagcacatgatctaccccatgataagacactgcttttgtattgctcaaagggtaccatg
agtcaattacacgctgagcaccttattcagcaaggatttgaaaacataaaagtattcaag
ccaaacaagtaa
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