Burkholderia metallica: WJ16_09150
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Entry
WJ16_09150 CDS
T04871
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bmec
Burkholderia metallica
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmec03009
]
WJ16_09150 (rimO)
Enzymes [BR:
bmec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WJ16_09150 (rimO)
Ribosome biogenesis [BR:
bmec03009
]
Prokaryotic type
ribosomal protein modification factors
WJ16_09150 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AOJ31662
LinkDB
All DBs
Position
1:complement(2047586..2048947)
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AA seq
453 aa
AA seq
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MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFTDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPDVLKRMKRPANAEKVLERVQKW
REICPDLTIRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSPVEGATANELDGAL
PDDVREARRARFMEVAEEVSAKRLQRKVGKTLKVLIDEVGEEGGIGRTAADAPEIDGVVY
VEPAAKASKRYKVGDFVSVKVTGADGHDLWGEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatcccccaaagtagggttcgtatccctcgggtgcccgaaggcgctcgtcgac
tccgaacagatcatcacgcaactgcgcgccgaaggttatgaaatctccggcacgtacgac
ggcgccgacctcgtcgtcgtgaacacctgcggcttcatcgacgaagcggtccaggaaagc
ctcgacgcgatcggtgaagcgttgaccgagaacggcaaggtgatcgtcaccggctgcctc
ggcgccaagtcgagcgccagcggctcgaatctgatcgaggaagtccatccgaaggtgctc
gccgtcaccggtccgcacgcggtgggcgaagtgatgcaggccgtgcattcgcacctgccg
aagccgcacgacccgttcaccgatctcgtgcccgcggccggcatcaagctcacgccgcgt
cactacgcatacctgaagatctccgaaggctgcaatcaccgctgcacgttctgcatcatc
ccgtcgatgcgcggcgacctcgtgtcgcgcccggtcgccgaagtgatgctcgaagccgag
aacctgttcaagtcgggcgtgaaggaactgctcgtgatctcgcaggacacgagcgcgtac
ggcgtcgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacgcgcatg
accgacctggtcgccgcgctgggcgaactcgccgcgcagtacggcgcatgggtgcgtctg
cactacgtgtatccgtatccgagcgtcgacgaagtgattccgctgatggccgaaggcccg
ttcaaggggcacgtgctgccgtatctcgacgtgccgttccagcacgcgcatccggacgtg
ttgaagcgcatgaagcgtccggcgaacgccgagaaggtgctcgaacgcgtgcagaaatgg
cgcgagatctgcccggacctgacgatccgcagcacgttcatcgcaggttttcccggcgag
acggaagcgcagttcgaaacgctgctcgatttcatccgcgaggcggaactcgatcgcgtc
ggctgctttgcctactcgccggtcgaaggcgcgaccgcgaacgaacttgatggcgcgctg
ccggacgacgtccgtgaagcgcgtcgcgcacgcttcatggaagtggccgaggaagtgtcg
gcgaagcgtctgcagcgcaaggtcggcaagacgctcaaggtgctgatcgacgaggtcggc
gaagaaggcggcatcggccggacggcggccgatgcgccggagatcgatggcgtcgtctat
gtcgagccggccgcgaaggcttcgaagcgctacaaggtcggcgatttcgtgtccgtgaag
gtcacgggcgccgacggtcacgacctgtggggcgaggtgtaa
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