Burkholderia metallica: WJ16_21905
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Entry
WJ16_21905 CDS
T04871
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bmec
Burkholderia metallica
Pathway
bmec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WJ16_21905
Enzymes [BR:
bmec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
WJ16_21905
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
DUF3612
Motif
Other DBs
NCBI-ProteinID:
AOJ34256
LinkDB
All DBs
Position
2:477931..479934
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AA seq
667 aa
AA seq
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MDDENDSAVLEAHVGTRSPCWRLGSDSNALELAAVRGLTNVAVALTAEQAARIRALTGVT
SHLVLDITLFGEPVSLHLVGRKVDPTDWAGTASAYSDTESVASDLAHGLAFAEQVVSEVN
SLVVILDRNGMVQRFNRLCEEVTGKREVDVIGRSAFELFMSPEEGAQSRSNITGFFASNH
SFAVERYINTVNGPRLFQFRNKFVQSGSGVDEQFLICSGIDITEERSAQQRLSELANTDV
LTGLPNRHAISERIHAAIAAETAVSRGQVGILFLDLDNFKRVNDHYGHITGDRLLQDVSA
IISGCLPSGATLARLGGDEFLVLFEHGTRPLLEATAQIILERLRTPIHLGLMEVYTSCSI
GIAMHPQHGDSLETLIRSADTAMYVAKEEGKHTYRVFSLEMNQKVAKYMWLDTNLRKALE
EEQFVLHYQPVVDIATGDVHGVEALIRWQSPDRGLVAPVEFIRFAEESGLIAPLGRWVMR
TAAAQAAAWKAQGLGIRIAVNVSARQLQDMNIVHQMASILDAAGLKPGLLDIELTESCFI
DDEDAANGLMRQFRQLGAEIHLDDFGTGYSSLSQLSRLPLDAIKLDRTFITGIDRNPRSQ
ALVRSVVSLAKALNFAVVAEGVETHAEAEFLKQLDVDHAQGYYYARPMPAQAFEAWLAET
RKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaaacgatagcgcggtgctcgaagcgcacgtcggtacgcgcagcccctgc
tggcgtctcggcagcgacagcaatgcactcgaactggccgccgttcgcggcctgaccaac
gtcgccgtcgcgctgacggccgaacaggctgcgcgcatccgcgcgctgaccggcgtcacg
tcgcacctcgtgctcgacatcacgctgttcggcgagccggtgagccttcatctcgtcggc
aggaaagtcgacccgaccgactgggccggcacggcctccgcgtattccgacaccgaatcc
gtcgcgagcgatctcgcgcacgggctcgcgttcgccgagcaggtcgtgtccgaggtgaat
tcgctcgtcgtgatcctcgaccgcaacgggatggtgcagcgcttcaaccgcctgtgcgag
gaagtgacgggcaagcgggaagtcgacgtgatcggccgcagcgcgttcgagctgttcatg
agccccgaggagggcgcgcagtcgcgcagcaacatcacgggctttttcgcgagcaaccat
tcgttcgcggtcgagcgctacatcaacacggtcaacgggccgcgcctgttccagttccgc
aacaagttcgtgcagagcggcagcggcgtcgacgagcagttcctgatctgctcgggcatc
gacatcaccgaggagcgcagcgcgcaacagcggctcagcgagcttgccaacaccgacgtg
ctcaccgggctgccgaaccgtcatgcgatcagcgagcgcatccacgcggcgatcgccgcc
gaaaccgccgtatcgcgcgggcaggtcggcatcctgttcctcgacctcgacaacttcaag
cgcgtcaacgatcactacgggcacatcaccggcgaccggctgctgcaggacgtgtcggcg
atcatcagcggctgcctgccgtccggcgcgacgctcgcgcggctcgggggcgacgaattc
ctcgtgctgttcgagcacggcacgcggccgctgctcgaagcgaccgcgcagatcattctc
gaacggctgcgcacgccgatccatctcgggctgatggaggtctacacgagctgctcgatc
ggcatcgcgatgcatccgcagcacggcgattcgctcgagacgctgatccgcagcgcggat
accgcgatgtatgtcgcgaaggaagagggcaagcatacgtaccgcgtgttctcgctggag
atgaaccagaaggtcgcgaagtacatgtggctcgacacgaatctgcgcaaggcgctcgaa
gaggagcagttcgtgctgcactaccagccggtcgtcgacatcgcgaccggcgacgtgcac
ggcgtcgaggcgctgatccgctggcagtcgcccgaccgcgggcttgtcgcgccggtcgag
ttcatccgcttcgcggaggagtcgggcctgatcgcgccgctcgggcgctgggtgatgcgc
accgcggccgcgcaggccgccgcatggaaggcgcaggggctcggcatccggatcgcggtg
aacgtgtccgcgcggcagttgcaggacatgaacatcgtgcaccagatggcgtcgatactc
gacgccgcggggctgaagcccggcctgctcgacatcgagctgaccgagagctgcttcatc
gacgacgaggacgcggccaacgggctgatgcggcagttccgccagctcggcgcggagatt
catctcgacgatttcggcaccggctattcgtcgctgtcgcaactgtcgcgcctgccgctc
gacgcgatcaagctcgaccgcaccttcatcacgggcatcgaccgcaatccgcgctcgcag
gcgctggtgcgctcggtcgtgtcgctcgcgaaggcgctgaatttcgcggtggtcgccgaa
ggcgtcgaaacgcatgcggaagccgaattcctcaagcagctcgacgtcgatcacgcgcag
ggctactactacgcgcggccgatgccggcgcaggcgttcgaggcgtggctcgcggagacg
cgaaagctcaggctgatcgcctga
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