Botrimarina mediterranea: Spa11_02570
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Entry
Spa11_02570 CDS
T09862
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmei03009
]
Spa11_02570 (rsmD)
Enzymes [BR:
bmei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
Spa11_02570 (rsmD)
Ribosome biogenesis [BR:
bmei03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Spa11_02570 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MethyltransfD12
MTS
Motif
Other DBs
NCBI-ProteinID:
QDV72087
UniProt:
A0A518K2S5
LinkDB
All DBs
Position
320653..321375
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AA seq
240 aa
AA seq
DB search
MAKRRPKSDIPTEAIDLRIIGGKYRGTKLTSEPLLHTSGAVAGERVTRPMKHRVREAIFN
LVGTDAEGKHAMDLFAGTGALGLEALSRGAASCLFIERHVPTAEIVKQNIKAMGVEGVCE
LMMASAFVWAQRDLGKRDGGRGTRETDPPSAIPNPQSPWLAFISPPYSFFIERQDEMLML
IEALLKHAPPESMLVIEADQRFDFSLLPGRVKEHRSESGWDVREYAPAVVGVLRIGDESV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgacgtcccaagagtgacatccccaccgaagcgatcgatctgcggatcatc
ggcggcaagtatcgcggtacgaaactgaccagcgagcccctgctgcacacgtcgggcgcc
gtcgcgggcgaacgggtcacgcggccgatgaagcaccgggtgcgagaggcgatcttcaac
cttgtcggcacggacgccgaggggaagcacgccatggacctgttcgcggggaccggcgcg
ctgggcctggaggccctgagccgcggggccgctagctgcctgttcatcgaacgccacgtc
cccaccgccgagatcgtcaagcagaacatcaaggcgatgggcgtggagggggtgtgcgag
ttgatgatggcgagcgcctttgtgtgggcgcaaagagacttagggaagagggacggggga
cgggggacgagggaaaccgatccgccatccgccatccccaacccgcaatcgccctggctg
gcgttcatctcgccgccatactcgttcttcatcgaacggcaggacgagatgctgatgctc
atcgaggcgctgttgaagcacgcgccgccggagagcatgctggtgatcgaagcggaccag
cgcttcgacttttcactccttcccggtcgggtgaaagagcatcgctcggaatcgggttgg
gacgtccgcgaatacgcaccggccgtggtgggtgtccttcgtatcggagacgagtccgta
tga
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integrated database retrieval system