Bombyx mori (domestic silkworm): 105842585
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Entry
105842585 CDS
T02817
Name
(RefSeq) uncharacterized protein LOC105842585
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03020
RNA polymerase
bmor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105842585
09124 Replication and repair
03420 Nucleotide excision repair
105842585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
105842585
03400 DNA repair and recombination proteins [BR:
bmor03400
]
105842585
Enzymes [BR:
bmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105842585
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105842585
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105842585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN_1
DUF2125
PAN_4
RSS_P20
Motif
Other DBs
NCBI-GeneID:
105842585
NCBI-ProteinID:
XP_037871455
LinkDB
All DBs
Position
2:3417355..3476633
Genome browser
AA seq
2162 aa
AA seq
DB search
MTRECEQICKQDKQCQAYDYGVGAKGNATCNLSNIDEKEIKEKSILGRHPDYDVYVRRFQ
CEQSPPSPMPLHDDPGPDEQKRPDNPDRPEGPLQRPVFRPDDEIFNDDYLISADLRPFES
GKPYRPDDYSNSKPDNDVPPSYGSHRPQEIPYEPIRPDHGFSRPQDTQYRPERPIKNQSY
NQKPSDELNFQGYGQPNRPEKPDYNYIIRPNRKPYQNSQDEGYGRPDRPSDIGHPSGPIG
PPSRPYRFDRPNRPRPDNAGQYASNFDHSSQNDNSIHVEIYDPPRPYRPIRGSYYGHQGY
GYLTQNSYAQNHGTITEIGGYSQNPPLDDNRPDPTTKPYGQYGYNGYRPQNSKPNDPTWN
QDYDKPVKGYTNQNSFTGQTGYGSNQSIKGNQYGSQNEYYQSQSDQSSYNSHNHHIGYGD
PGQNEPYKPSKPDRPNDYHQSQSDQSSYNSHNDHIGYGDPGQNQPYKPSKPDRPNDYQSQ
SDQLSYNSQNHHIGYGDPGQNEPYKPSKPNRPNDYHQSQSDQPSYNTQNYHNGYGDTGQN
RPNKPLKPDRPNDYGPADYGQNSYQSQHSYSSSQSNYHSNQHVYESQVYGRPDQSYSNRP
NYKPSYNDYGSYGQTNGQNHDQGNHYGETNHGSYGSTQSSHGQQDFYNSNQNSYGNTQNA
YQDDRYKGSKGSYGGSQSSYHGVSQGISHDYHLSNGNKGSYDAYPPSQSGYGGQNYGTQF
DQGTKGSYSNQSSYGNKGSYGTNQDYSNSQNVYGTSLNDDSYTTPSYGSNQNAETSHKGR
PQRPNNKKPNDSPAYYKPNTESENPGYNVKPVYENEMDRPHAPGYTAGPGGEVVTSRPVA
VGDYGAGYREPGKEDSTKACFRRVLVGRRALRSHVRRVVSGQSLEDCKTECAVEHRFPCE
SFNYRLDPSFRGKSLCELMTKPIEAFDLRRDFAEDKDYDFYESDRNSLEPYCPDSLRGQG
LLHSGYLTTQNRAEDRWGGGYVGSYGQRKHDDTNFIPYQIGIRRKNDPREHENWGQYGGY
YGGYDYYKDRNDYYKSQSHWNLNNAIDRAYSSEGVRPLTTIIRPHKSMADFDYNKLAKDT
PWNERYGSWKREKWNSSGSSFNSFDYGGYHHYGPTFELEGRSDENDPKDCSSRRSAGMSL
SSGSIRRSLYAKNVVECEASCFEEREFKCVSYSYRYSNSRGSDNCFLSERPYRGLEMSAD
SSSDVYAMPQSHDCVNVNYDPWVESECFWHVRSGAAVTGAAVRAALTVAGLGACEAECIR
ASGFFCRGFSFRFEAPITGEDLENCILTSSPPASLPPSRAAHHELYARGRAGRGCQPALH
DAHPEPGTQCYLQYDSAAQLSPSAVRGRARVRDEGACGVACTDAPFRCLSYSFKNNAPPD
RDNCFLSEIRLFDLQRGVDYVHSTDDWLFAFDLFNGQCWRKIHGPDYDEPTHELPRPILT
SGSEESFPVSGPSGPGYSESDPPYISEGHIKPFKPTIYKPIYPEPNGPDFEPHYETSGHF
YKPTYSIEPSGPYKPGFAEPSGPDFKPHFEPVGPVLKPVYPLNEPPFESTRPGLKPLYPV
QPNFKPRPVEPSVYRPEYPVQKPGYVPKPAYRPPEHDRPFVPTSPPGYRPGRPGFNPGSK
PGFEGDREDGIAVSWRHYTVSGFPCRAGTSCAQNHVAGHWACEPEGGEIGSWDYCCAPTH
RCGYSEGFNKPWCYVGPESDQWRPCSEKYYPYHQHNVPHPSQANRDETSRPSGSSHPHTN
RPGPYLSEADRRYWDELYKNGPQAYYDRYGNPLPGYTRVPTSDPPHIKPEYSRPASGSWA
PAQGGGTRDGLGVPRYWPVAYLHKGPPPNMTYFRYNETTTTEMPKPAESRDLPDDRDSPD
QQTLIDKPKIIDNHRGEKKRNISDHDEELHIDIDKTTTAKTVSEVTEIIERVNKSETEST
TSDKDVDKMDLIDGIDDKLLDFSKSIEVFDIEDAKKSAKADLKTLRAEERQIEEIGRLLA
SRRDGKVVLEKRSQKELASKNIAVDEDLLDFNFGNKFPVERRGVVRKVTKDEIERDRNTD
RSLEVSETTFVRPPRVLATTENIRKAIVNGKIFYDATIREQRDVLTNATRRSKSLRPLED
RAPSVINSANFGKKKIIKTRNVNPVRRVRRVYRKRYNPEEVRRRLLERDRAKESSVDSSR
KI
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaatgcgaacaaatttgcaaacaggataaacaatgccaagcttacgattat
ggtgttggagctaaaggcaacgccacatgcaacctgagtaatatagacgagaaagagatc
aaagaaaaatcgatactgggccgccaccccgactacgacgtgtacgtgcggaggttccaa
tgcgagcagtcgccgccttcaccgatgccgctgcacgacgacccaggtcctgacgaacag
aagcgcccagataacccagaccggcccgaaggtccccttcaacgcccagtcttcagaccg
gacgacgaaattttcaacgatgattacctcatctccgctgacttgaggcctttcgaatct
ggtaaaccgtacaggcctgatgattattccaattcgaaaccggataacgatgttcctccg
agttacgggtcacacagaccgcaagaaataccatatgaacctattaggcctgatcacggt
ttcagtagacctcaagatacgcagtacagacccgaaagaccaattaaaaatcagtcatat
aaccaaaaaccatcggatgaactaaactttcaagggtatggacaacctaatagaccagaa
aaaccggattataattacataattagaccgaacaggaagccttatcagaactctcaagac
gaaggttacggaaggccagataggccaagtgatattggacatccttcaggaccaatcgga
cctccaagtagaccgtataggttcgacagaccgaatcgtcctagaccggacaacgccgga
caatatgcaagcaatttcgatcatagtagtcaaaatgacaactcaattcacgttgaaata
tatgatccaccacgaccatacagacccatccgtggttcctattatggtcatcaaggatac
ggctatttaacccaaaatagctacgctcaaaatcatggaactattacggaaatcggtggc
tacagccaaaacccgccgcttgatgataatagacccgatccgactactaaaccttacggc
caatacggatataatggttatcgacctcaaaattccaaaccaaacgacccaacctggaac
caggattacgataaacctgtcaaagggtacacaaatcaaaactcatttacaggacaaacc
ggttatggttcaaaccaatccattaaaggtaatcaatacggcagtcaaaacgagtattat
caaagccagagtgatcagtcgtcatataatagccataatcatcatattggttacggggac
cccgggcaaaatgagccatacaaaccatcgaaaccggataggccgaacgattatcatcaa
agccagagtgatcagtcgtcatataatagccataatgatcatattggttacggggacccc
gggcaaaatcagccatacaaaccatcgaaaccggataggccgaacgattatcaaagccag
agtgatcagttgtcatataatagccaaaatcatcatattggttacggggaccccgggcaa
aatgagccatacaaaccatcgaaaccgaatagaccgaacgattatcatcaaagccagagc
gatcagccgtcatataacactcaaaattatcataacggttacggagataccgggcaaaat
cgtccaaacaaacctttgaaaccggacagaccaaacgattatggcccagctgattatgga
cagaattcgtatcaaagccaacattcatacagttctagtcaaagcaattatcacagcaac
caacatgtctacgaaagccaagtgtatggtaggccagatcaaagctatagcaatagacca
aactacaaaccttcttataacgactatgggtcttacgggcaaacgaatggtcaaaatcat
gatcagggcaatcactatggcgaaaccaaccatggctcatatggttctactcaaagctct
catggtcagcaagatttttataattccaatcaaaactcttatgggaacacccaaaatgca
tatcaggatgataggtataaaggtagcaaagggtcgtatgggggttcgcaaagctcatac
cacggagtttcccaaggtataagtcatgattatcatttatcaaatggaaacaaaggttca
tatgatgcatatccccctagtcaaagtggttatggaggccaaaactatggtacccaattt
gaccagggtactaagggcagctattcaaatcaaagctcgtatggaaacaaagggtcttat
ggaacaaatcaggactatagcaatagtcagaatgtttatggaaccagcctgaatgacgac
agctacacgacaccgagctatggctcaaaccaaaacgcagagaccagccacaaaggacgg
ccccaaagacctaataacaaaaaacccaacgattcaccagcttattataaaccaaataca
gagtcggagaaccctggatataacgtgaaaccggtttacgagaatgaaatggatcggccc
catgctcctggctatacagctgggccggggggtgaggtggtgacttcgcgaccggtagct
gtcggggattacggagccggatacagggaaccgggtaaagaagattccaccaaagcatgc
tttcgtcgtgtattggttggaaggagggcgcttcggagtcacgtcaggagggtcgtgtct
ggacagtcgctggaggattgcaaaacggagtgcgctgtagaacacaggttcccgtgcgag
agttttaattacagattggacccctcgttccgaggcaaaagcctctgcgagctcatgaca
aaaccgatagaagctttcgatctccgaagagacttcgctgaagacaaagactatgatttt
tacgaaagcgaccggaatagtttggagccttattgccctgatagtctgcgcgggcaagga
ttgctgcattctggttatctgaccactcagaatcgggccgaagacagatggggtggagga
tacgtcggttcttatggacagagaaaacatgatgatacgaacttcattccttatcagatt
ggtataagaaggaagaacgatcccagagaacacgagaactggggacaatatggaggctat
tatgggggctacgactattacaaggacagaaacgactactacaaatcgcagagccattgg
aacttaaacaacgcgatcgacagagcctacagctctgagggagtcaggccattgactacc
atcatcaggccccataaatcgatggcggatttcgactataacaaactagcgaaggatacc
ccgtggaacgaaagatacgggtcttggaaaagagagaaatggaacagctcaggatcgtca
tttaatagcttcgattacgggggctaccatcattacggacccacgtttgagctggaaggc
agaagcgacgaaaatgatccgaaagattgctcgtctcggagaagcgccggtatgtctctg
agtagtggttcgataaggaggtcgttgtacgccaagaatgtggtggaatgcgaggcatcg
tgctttgaggagagggagtttaaatgcgtctcctacagctacagatactcaaattcgcgc
ggctccgacaactgctttttgagcgaaaggccgtacagaggcttggagatgtccgcggac
agcagctccgatgtgtacgcgatgccacaaagccacgactgtgtcaacgtaaattatgac
ccttgggttgaaagtgagtgcttctggcatgtgaggtctggagctgcggtcaccggggcc
gcagtgagggccgccctcaccgtggccggtctgggagcgtgcgaggcggagtgcattcgg
gcctccgggtttttctgcagaggttttagtttcaggttcgaggccccgattacaggagag
gacttagagaactgtatcctgacttcgtcccctcccgcctcgctgcccccaagccgtgcg
gcccaccacgagctgtacgcgcgggggcgcgcggggcggggctgccagcccgcgctgcac
gacgcccaccccgagcccgggacacaatgctacctccagtacgacagcgcggctcagcta
tccccctcggccgtgcgggggcgcgcgagggtccgggacgagggggcgtgcggggtggcg
tgcaccgacgcgcccttccggtgcctgagctactccttcaaaaataacgcaccaccggac
cgcgataactgcttcctctccgagataagactgttcgatcttcaaaggggagtggactac
gtacattccactgacgactggctcttcgctttcgatctattcaacgggcagtgctggagg
aagatccacggaccggattatgatgagcctacacacgaacttccgagaccgatcctgaca
tctggttctgaagagtccttcccagtgtcaggtccctctggtcctggttactctgaatca
gatcctccttacatatctgaaggacacataaagccgtttaaaccaacaatatacaaaccg
atatatcctgaaccaaacggtcccgatttcgaaccacattacgaaactagtggacatttt
tataaaccaacgtattctattgaaccaagtggaccttacaaaccgggttttgctgaacca
agtggtccagatttcaaaccacatttcgaaccagttgggccggtactcaaaccggtatac
cctttaaacgaacctccatttgaatccaccaggcccggtcttaaacctctctatccggtg
cagccaaatttcaaaccgcgtccggtcgaacctagtgtctatagacccgagtatccggtt
cagaaaccaggatacgtgcccaaaccggcgtaccgacctccagaacacgatagacccttt
gtccctaccagtccacccgggtaccgacctggacgacctgggttcaatcctggctcaaaa
ccgggctttgaaggagacagggaagatggaattgccgtatcttggcgccactacacggtg
tccgggttcccctgccgagcggggacttcctgcgcgcagaaccacgtcgccggccactgg
gcttgcgaaccggagggtggagaaatcggatcgtgggattactgctgtgcgccaacgcat
cgctgtgggtacagcgaaggtttcaataaaccctggtgctacgtgggcccagagagcgac
caatggcgcccgtgtagtgaaaaatactacccttaccatcaacacaacgtgccgcatccc
tctcaagcaaacagagatgaaacctctcgaccttcgggttcgagccatccacacacaaat
agacctggtccgtacctatctgaagctgatagaagatactgggatgaattatacaaaaac
ggtcctcaggcgtattacgatagatacgggaatcccttaccagggtatacaagagtaccg
acatcagatccgccgcatataaaaccagaatattctcgacctgcttccggatcctgggcg
ccagcacagggaggaggtacgcgtgatggactcggtgtgccgaggtactggccggtggcc
tacctacacaaaggtcctccaccaaacatgacttattttagatacaacgaaacgacaact
actgaaatgccaaaacccgcggaatccagagacctaccagacgatagggactcgccagat
caacagacacttatcgacaaaccaaaaatcatcgacaaccatagaggcgagaagaaacgt
aatattagcgatcatgacgaagaacttcatatcgacatcgacaaaacgacaacagctaaa
actgttagcgaagtcactgagattattgaaagagtaaataagagcgagacagaaagcaca
acttctgacaaggacgtagataaaatggatcttatcgatggaattgatgataaactatta
gatttctctaagtctattgaagtatttgatatagaagacgctaagaagagtgcgaaggca
gatcttaaaactctacgagcggaagagagacagatagaagaaataggacgactgttggct
tcaaggcgcgacgggaaagttgtcttggaaaagcgatcgcagaaagaattggcctcaaag
aatattgcggtcgacgaagatttgctggacttcaatttcgggaataaattcccagtagaa
aggagaggagtcgtacggaaagtgacaaaagacgaaatagagagggacaggaataccgat
agaagcctagaagtgagcgagacaacgttcgttagaccaccaagagtactagctacaact
gaaaacatacgcaaagcaattgtcaacggtaaaatattttatgacgccacaatcagagag
cagagagatgtgctaacgaatgccactcgaagatccaaatctctgaggcctctggaagac
agagccccatcagtgattaattctgctaatttcggaaagaagaaaattataaaaactaga
aacgtaaatcctgtgaggagagtcagaagagtttacaggaaaagatataacccggaggaa
gttagaaggagactgttggagagagatagagctaaagagagttctgttgatagcagtagg
aaaatttaa
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integrated database retrieval system
