Balaenoptera musculus (blue whale): 118905626
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Entry
118905626 CDS
T09887
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus01524
Platinum drug resistance
bmus03430
Mismatch repair
bmus05200
Pathways in cancer
bmus05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118905626 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118905626 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
118905626 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
118905626 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118905626 (MSH6)
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118905626 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
118905626
NCBI-ProteinID:
XP_036728200
EnsemblRapid:
ENSBMSG00010021923
UniProt:
A0A8B8Z7P7
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All DBs
Position
13:complement(50691716..50709972)
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AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNNASKGPVGASSESAAAAATGASPSPGEDAAWSEAGPGPGPLA
GSTSRAEARNLNGGLRKSAAPAVPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEETEAGATYASDKSEEENEIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVAPKR
KRMVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNSESQAHISGGCDDSS
RPTIWYHETLEWLKEEKRRDTHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLL
SLKEKEDDSSGHARVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSVETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDSGVMLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVRAT
RPGAVFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCNPYVISDRLDAIEDLMVVPDRISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVLCKIIGVMEEVIDDFKSKILKQVLTLQTKNPEG
RFPDLTLELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEENGKAYCVLVTGPNMGGK
STLMRQAGLLVVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKA
REFEKMTQSLRLFREVCLASERSTVDAEAVHKLLTLIEEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagccctgaataatgcc
agcaaaggcccggtcggggcctcaagtgaaagcgccgccgccgctgccaccggggcctcc
ccttccccaggcgaggatgcggcctggagcgaggccgggcctgggccggggcccctggcg
ggctccacttcgcgggccgaggcgaggaacctcaacggagggctgcggaagtcggcagcc
cctgcggtccccgccagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccttggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaaggaaagtctgcccgagttcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcagaaggctattaaagccatatacaggttcaaagtcaaaggaagcccag
aaaggaggtcatttctacagttcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattaagaggcttgaattggcagtgtgtgatgagccctca
gaaccagaggaggaagaagagacggaggcaggtgccacttacgcatcagataagagtgaa
gaagaaaatgaaattgagagtgaagaggaagtgaggccaaaggtgcaaggatctaggcga
agtagccgccagataaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaatttaagccagatgctaaggaggaaggaagcagtgatgaaataagcagt
ggagtaggggatagtgacagtgaaggcctggacagccctgtcaaagttgctccaaagagg
aagagaatggtaactggaaatggctccctcaaaaggaaaagttcaaggaaggaaatgccc
tcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgctttc
tctgcccctcaaaattctgaatcccaagcccacattagtggaggatgtgatgacagtagt
cgccccaccatctggtatcatgaaactttagagtggcttaaggaggagaagagaagagat
acgcacaggaggcgacctgatcaccctgattttgatgcatccacactctatgtgcctgag
gatttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaac
tttgatcttgtcatattttataaggtggggaagttttatgagctgtaccacatggatgct
cttattggagtcagtgaactagggctggtattcatgaaaggcaactgggcccattctggt
ttccctgaaattgcatttggccgatattcagattccctggtccagaagggctataaagta
gcacgggtggaacagaccgagaccccggaaatgatggaggcacgatgccgaaagatggca
catatatctaagtatgatagagtggtgaggagggagatctgtagggtcattaccaagggt
acacagacctacagtgtgctggaaggtgacccctcagagaactacagtaagtaccttctt
agcctcaaagaaaaagaagatgattcttctggccatgctcgagtgtatggagtatgtttt
gttgatacctcgctagggaagttcttcataggtcagttttcagatgatcgccattgttcc
aggtttaggactttagtggcacactatcctccagtacaagtcttgtttgagaaaggaaat
ctctcagtggaaactaagatgattctcaagggttcattatcctcttctcttcaggaaggt
ctgataccaggttcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttacggacaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaa
ggtatgacctcagagtctgattctattgggttgacaccgggagagaagagtgaattggcc
ctctctgctcttggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatattcccttggattctgacacggtccgtgctaca
agacctggtgctgtctttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
aacaacttggagatttttctgaatggaacaaatggttctactgaagggaccctgttagag
aagattgatacttgccatactcccttcggtaagcggctcctaaagcaatggctttgtgcc
ccactctgtaacccttatgttatcagtgatcgtctagatgccatagaagacctaatggtt
gtgcctgacagaatctctgaggttgtagaccttctaaagaagcttccagaccttgagagg
ctactgagtaaaattcataatgttggctctcccctgaagagccagaaccacccagatagc
agggctataatgtatgaagaaaccacatacagcaaaaaaaagattattgattttctttct
gctctggaaggattcaaagtactatgtaaaattataggggttatggaagaagtcattgat
gactttaagtctaaaatccttaagcaggtccttactctgcagacaaaaaatcctgaaggc
cgctttcctgatttgactttagaactaaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggactgattactcccaaagcaggatttgactctgattatgatcaggct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgtagt
cgaattggctgtaggaccatagtctactggggaattggtaggaatcgttaccagttggaa
attcccgagaatttcatcacccgtaatttgccagaagaatatgagttgaaatctactaag
aagggctgtaaacgatactggaccaaaacaattgagaaaaagttggctaatctgataaat
gctgaagaacggagagatgtatcattaaaggactgcatgcggcgactgttctataacttt
gataaaaattacaaggactggcaggctgccgtggagtgcatcgcagtgctggatgtctta
ttgtgcctggctaactacagtcgagggggtgatggtcctatgtgtcgtccagtaattctg
ttgccagaagaagatactcctccctttctagaccttaaaggatcacgccacccctgcatt
acgaagactttttttggtgatgactttattccaaatgacattctaataggctgtgaggaa
gaggaagaaaatggcaaagcttactgtgtgcttgttactggaccgaatatggggggcaag
tctacgctcatgagacaggctggcctattagttgtaatggcccagatgggttgttatgta
ccagctgaagtgtgtaggctcacaccaatcgatagagtgtttactagacttggtgcctca
gacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgccagtata
cttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagaatataaag
tgtcgtacattgttttctacccactaccattcattagttgaagactattctcaaaatgtt
gcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagccag
gagactattaccttcctgtacaaattcattaaaggagcctgtcctaaaagctatggcttt
aatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaagca
agagaatttgagaagatgactcagtcactgcgattatttcgggaagtttgtctggctagt
gaaaggtcgactgtagatgctgaagctgtccataagttgctgactttgattgaggaatta
tag
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integrated database retrieval system
