Brassica napus (rape): 106352276
Help
Entry
106352276 CDS
T04128
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106352276
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
106352276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106352276
NCBI-ProteinID:
XP_013647390
LinkDB
All DBs
Position
C7:complement(41239765..41241552)
Genome browser
AA seq
397 aa
AA seq
DB search
MGVHFGISVLFVVCLLGLSANAKDFTITAPPGSDITSLLLKTFNEACQFPTKSSVLIPKG
EYKLRQIEMMGPCKAPIRITLQGTVKADGNVNGNDFWVAFRRINGFKLNGGGVFDGEGNA
AWRANNCHKMALTQCKKLPISIRFDFVTDAKIRGITSMDSKNFHINVLGARNMTLEEITI
IAPEESPNTDGIHVGRSVGVQIINSNIKTGDDCISIGDGTRDLLVERVTCGPGHGISIGS
LGLYVKEEDVTGIRVVNCTLINTDNGVRIKTWPSAACSTTASGIHFENIILKNVTNPILI
DQEYCPWNRCNKNKPSTIKLVDISFKHIRGTSGNKDAVKLLCSKGFPCKNVEIGDINIQY
TGADGPATFQCSNVSPTLMGTQVPKACSSPVTKLPGQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtacattttggaatatctgtattatttgttgtttgtttgctaggtttatcagca
aatgctaaagatttcacaatcactgctcctccaggttctgatatcaccagcttattgttg
aaaacattcaatgaggcatgccagttcccaaccaagagcagcgttttgatccctaaaggt
gaatacaagcttaggcaaatagagatgatgggtccatgcaaagctcccataaggattact
cttcaaggcactgtgaaagctgacggaaacgttaacgggaatgacttctgggtcgctttc
cgcaggattaatgggtttaagttgaacggaggtggtgtctttgacggtgaaggtaacgct
gcatggagggctaataattgccacaaaatggcattaactcagtgcaagaaactccctatc
agcatacggtttgatttcgtgactgacgctaagataagaggcataacctcgatggattca
aagaacttccacattaacgtgctcggggcaaggaacatgacattggaagaaatcacgatc
attgcccctgaagagagtcccaacaccgatggaatccacgtgggaaggagtgttggagtc
cagatcatcaactcaaacatcaaaacaggagatgactgcatctctattggagacgggacg
agagaccttcttgtcgaaagagttacatgcggtccgggacatggaatcagtattggaagc
ctcggtttatacgtgaaggaggaagacgtcactggcatcagggtcgtgaactgcaccctc
ataaacactgacaatggtgtaaggatcaagacatggccgtctgcagcttgctccaccacc
gcctcgggtatccattttgagaatattatcctcaagaacgttaccaaccctatcctcatc
gaccaagagtactgcccctggaaccgatgcaacaagaacaaaccatcaacaatcaagctg
gtggacataagcttcaagcatatcagaggaacatcagggaacaaagacgccgttaagctt
ttgtgcagcaagggatttccgtgcaagaacgtggagattggtgacattaacattcagtac
accggagccgatggaccagcgacattccaatgctccaacgtatctcccacgttgatggga
actcaggtccctaaagcatgtagcagcccagtgactaagctaccaggccagtaa
DBGET
integrated database retrieval system
