Brassica napus (rape): 106353620
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Entry
106353620 CDS
T04128
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
bna
Brassica napus (rape)
Pathway
bna00052
Galactose metabolism
bna00511
Other glycan degradation
bna00531
Glycosaminoglycan degradation
bna00600
Sphingolipid metabolism
bna00604
Glycosphingolipid biosynthesis - ganglio series
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
106353620
09103 Lipid metabolism
00600 Sphingolipid metabolism
106353620
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
106353620
00604 Glycosphingolipid biosynthesis - ganglio series
106353620
00511 Other glycan degradation
106353620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106353620
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
106353620
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106353620
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
TgpA_N
Motif
Other DBs
NCBI-GeneID:
106353620
NCBI-ProteinID:
XP_013648830
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All DBs
Position
A7:20713377..20718338
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AA seq
705 aa
AA seq
DB search
MLDQAYFCRRGTMAKISRPSTGRHRLAFVLLLFLVAVGICVPVFALLPSLSSHQYLPPAL
SRDEKMMSRRFYIKDDKFWKDENPFQIIGGDLHYFRVLPEYWEDRLMRAKALGLNTIQTY
VPWNLHEPKPGKFVFEGIADLVSFIKLCQKLDLLVMLRAGPYICGEWDLGGFPAWLLAVK
PPLRLRTADPAYLKLVERWWNVLLRKVFPLLHSNGGPVIMVQIENEYGSYGNDKAYLRNL
VTMARGHLGNDIILYTTDGGTREALEKGNVPLYDVYSAVDFSTGDDPWPIFELQKKFNAP
GRSPPLSSEFYTGWLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYNG
ANTGSDEFDYKPDLTSYDYDAPIKESGDINNLKFKALQRVIKKYSAAPHTTNPSNTKRKA
YGPIKMQRTISLFDLMTMTDPVDMITSANPISMESAGQMFGFLVYESSYISKKSGNILRI
PKVHDRAQVFVSCLSQDVDGGVLRYIGTTERWNNQPVSIPTTECASNTSLFILVENMGRV
NYGPYIFDEKGILSPVYLDGQIIHGWKMIPIPFHNLSQMPNLSFEMQHTKKRSKKFELTK
DVGQNEPALFAGEFSINSVDEIKDTYLSFNGWGKGVAFINKFNIGRYWPSVGPQCNLYVP
APLLKAGRNYVVIFELESPHVDLLLRSVDQEDFTCGSNYSKVNQL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcaagcttacttttgtagaagagggacgatggcgaagataagcaggccatca
acaggaagacatcgtttggctttcgtgttgcttctgtttcttgtggctgtcggaatctgt
gttcctgtctttgctctccttccgtcactgtcctctcatcagtatctgcctcctgcgcta
agtcgagacgagaagatgatgtctcggagattttatataaaagacgacaagttctggaaa
gatgagaatcctttccagatcattggtggtgatttgcactacttccgagttcttcctgag
tactgggaagataggcttatgagagccaaggctttaggtctgaatactatacaaacgtat
gttccttggaatctgcacgaaccaaagcctgggaagtttgtctttgagggcattgctgat
cttgtgtcctttatcaagctttgtcagaaactagatttactggttatgctgcgtgctgga
ccttatatctgtggagaatgggatttgggcggttttcctgcttggttacttgctgtgaaa
ccacctctgagactaaggacagcagatcctgcataccttaagttggtggaaagatggtgg
aatgtcttattgcggaaggtatttcctctgcttcacagcaacggtggtcctgttataatg
gtccagattgaaaatgaatatgggtcatatggaaatgacaaagcttatcttcgtaatcta
gttactatggctaggggacacctggggaatgacattattctgtatacaaccgatggaggt
acaagagaagcacttgagaaaggaaatgtccccttatatgatgtctactcagctgttgac
ttcagtacgggtgatgacccttggccaatatttgaattgcaaaagaagtttaatgctcca
ggaagatcacctccactttcttcggagttctatactggttggcttacgcattggggtgag
aagattgcgaaaacagatgctgaatttacggcagcttcccttgaaaagatattatccaga
aatggttcagctgtgctatatatggtgcatggaggaacaaactttggtttctacaatgga
gcaaatactggctctgatgaattcgactacaaaccagatctgacttcctatgattatgat
gctccaatcaaggagtctggtgacataaataatctaaaattcaaagctctccagagagtg
attaagaagtacagtgctgcacctcacaccactaacccctccaataccaaacggaaagcg
tatggcccaataaagatgcagaggacaatatctctgtttgatttgatgactatgacagat
cctgtagatatgatcacttccgccaatccaatttcaatggaatctgctggacagatgttc
ggatttcttgtatatgaatcgtcatacatttccaaaaagagtgggaatatactaagaata
cccaaggttcatgacagagctcaagtgtttgtttcatgcctttcccaagatgttgatggg
ggagtactgagatacattggtacaactgagagatggaacaaccaacctgtttctattcca
actactgagtgtgcctctaacactagcttatttattctggttgaaaacatgggtcgtgta
aactacggaccatatatctttgatgagaagggcattctgtctccagtttatctagatggt
cagattatccatggatggaagatgataccaattccttttcacaacttgagtcaaatgccg
aatctcagtttcgagatgcaacatactaaaaagagaagtaagaagtttgagcttactaaa
gatgtgggtcaaaacgaaccagctctgtttgctggtgagttctctatcaacagtgtagat
gaaatcaaagacacttatctatcattcaacggttggggcaaaggagttgcttttatcaat
aaattcaacatcggaagatattggccgtctgttggaccacaatgcaacctctacgttcct
gcaccgctccttaaggctggcagaaattatgtggtgatctttgagttggaatctccacat
gtcgaccttttgcttcggtcagtggatcaggaagacttcacatgcggttcaaattattcc
aaagtcaatcagttgtag
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