Brassica napus (rape): 106359177
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Entry
106359177 CDS
T04128
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
Module
bna_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106359177
Enzymes [BR:
bna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
106359177
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
106359177
NCBI-ProteinID:
XP_048593918
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Position
A8:complement(18271270..18275297)
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AA seq
544 aa
AA seq
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MDSLSYSSVKSMLIQARGSLNSRLSEFEPLALLVAPLVTLFLAQVIGSVLGVVHEKGLKA
CLLGFIMGFLKMIPGVQSYIDAEKQKVVDQLQSGGSSKKNNWAKELPVKGLGVQVLEKME
TEKRNDPNWQGKCSGTVYIGGNESEGHFTLINQACSMFAHTNPLHIDVFQSVVRFESEVV
AMTAALLGSKETVSGEQICGNMTSGGTESIVLAVKSSRDYMKYKKGIKRPEMIIPESGHS
AYDKAAQYFNIKLWRVPVGKDFRADVKAMRRHINRNTIMIVGSAPGFPHGIIDPIEELGQ
LALSYGICFHVDLCLGGFVLPFARKLGYQIPAFDFSVQGVTSISIDVHKYGLAPKGTSTV
LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLENTGKIM
EASKRLEEGVRGISELFVVGKPDMTIVAFGSKSLDIFEVNDIMSSKGWHLNALQRPNSIH
ICVTLQHVPVVDDFLQDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFM
DSQY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggattctttatcatattcttcggtgaaatctatgttgatccaagctcgaggctcgctg
aactcgcgtctgtcggagtttgagcctctggctcttctcgttgccccgcttgtcactctc
tttctagctcaggttatcggatctgtgttgggcgttgtccacgagaaaggcctgaaagca
tgtcttctggggtttatcatgggcttcctcaaaatgattcctggagtacaaagctacata
gatgctgagaaacaaaaggttgttgatcagttacaatctggtggcagctctaagaaaaat
aattgggctaaagaactgccagtaaaaggtttaggtgtccaagttcttgagaaaatggag
accgagaagagaaatgatcctaattggcaaggaaaatgctctggcactgtatacataggt
ggaaacgagtctgaaggacattttacattgataaatcaagcatgttcaatgtttgcgcat
accaatccgttgcatatagacgtgttccagagcgtggtgaggtttgaatcagaagtagtc
gcaatgactgctgctttactcggaagcaaagaaacggtttcaggtgaacagatatgcgga
aacatgacgtctggaggaacagagagtatagtgttggctgtgaagtcatctcgtgactat
atgaagtacaagaagggaatcaaacgaccagaaatgattatacctgagtcgggtcactcg
gcttatgataaggcggctcagtatttcaacatcaagttgtggcgagttccagtaggcaaa
gacttccgagctgatgtgaaggcaatgaggaggcatattaacagaaacaccatcatgatt
gttggatcagcaccaggattccctcatggcatcattgatcctattgaggagcttggtcaa
ctggctcttagctatggaatatgctttcatgttgacctttgccttggtggatttgtgtta
cctttcgctcgaaagcttgggtaccagatcccagcttttgatttttctgtacaaggagtc
acttcaatttccattgatgtgcataaatatggtttggctcctaaaggaactagtacagtt
ctctacagaaatcatgagatcagaaagcaccaatttgttgctgtaactgaatggtcagga
ggactatacgtgtctccaacaatagctgggagtaggcctggttctttggttgctggtgct
tgggctgcaatgatgtcactaggagaagaaggctatctagaaaacacaggaaagataatg
gaagcatcaaagagactagaggaaggtgtaagaggaatcagtgaactgtttgtcgttgga
aaaccagatatgacgattgtggcgtttggttctaaatcattagatatctttgaagttaat
gacatcatgtcttccaaaggttggcatttgaatgcactccagagacccaacagcattcat
atatgtgtaactcttcaacacgtccctgtggtggatgacttcctccaggatctgcgtgaa
gctgtagagactgtgaaagcaaacccaggaccaatcacaggaggcttggctccaatatat
ggagcagcaggtaagatgccggaccgagggatggtgaatgagcttcttgttagtttcatg
gacagtcagtactaa
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