Brassica napus (rape): 106369042
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Entry
106369042 CDS
T04128
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
bna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106369042
09124 Replication and repair
03420 Nucleotide excision repair
106369042
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
106369042
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106369042
03019 Messenger RNA biogenesis [BR:
bna03019
]
106369042
03400 DNA repair and recombination proteins [BR:
bna03400
]
106369042
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
106369042
2.7.11.23 [RNA-polymerase]-subunit kinase
106369042
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: CMGC group
CDK family
106369042
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106369042
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
106369042
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106369042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Haspin_kinase
Seadorna_VP7
DUF6193
Motif
Other DBs
NCBI-GeneID:
106369042
NCBI-ProteinID:
XP_013664595
UniProt:
A0A078G9M3
LinkDB
All DBs
Position
A9:40740627..40743282
Genome browser
AA seq
389 aa
AA seq
DB search
MEQPKKVADRYLKQEVLGQGTYGVVFKATDTKTGETVAIKKIRLGKHKEGVNITALREIK
MLKELKHPHIILLIDAFPHKENLHLVFEFMETDLEGVIRDSNVFLSPADIKSYLLMTLKG
LAYCHEKWVLHRDMKPNNLLIGPDGQLKLADFGLARIFGTPDRKFTHQVFARWYRAPELL
FGAKQYGATVDVWAAGCVFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMKSLP
DYVEYQFVPAPSLRSLFPAVSEDALDLLSKMFTYDPKARISVKQALEHRYFTSAPSPTDP
AKLPKPLRKQETKASYGKHEAIKVVSPPRKIRRVIPERGWVDGMKSHVDKDQQAPMSLDF
TVLAERPPNRPTITSADRSHLKRKLDLDF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccaaagaaagtagctgataggtatctcaagcaagaggttctcgggcaaggt
acttacggcgtcgtcttcaaggccactgatactaagacaggagaaactgtagcaatcaag
aagataaggcttggtaaacacaaggaaggtgtaaacattacggctctcagggaaatcaaa
atgctcaaagagctaaagcatcctcatatcattctcttgatcgatgcgtttcctcacaaa
gagaacttgcaccttgtgtttgagttcatggagactgacctcgaaggagtcattcgcgat
tcaaacgtgttcctctcacctgccgacatcaaatcttacctcctaatgacacttaaagga
cttgcttattgccacgagaaatgggttttgcacagggatatgaagccaaataacttgttg
ataggacctgatggacagctgaaacttgcagattttggattagcacgtatatttggtact
cctgatcgtaagtttacccatcaggtgtttgctagatggtacagagcaccagaacttttg
tttggtgcaaaacaatatggtgctacagttgatgtttgggctgctggctgcgtatttgct
gaacttctgctacgcagaccatttcttcaggggaacagtgatatcgatcaattaagcaaa
atatttgctgcctttgggacaccaaaagcggatcaatggccagacatgaaaagccttcct
gattacgtagagtatcaatttgtcccagcaccttctctacgttctttattcccagcagtt
agtgaagatgctctcgatttattgtccaagatgtttacatatgacccaaaggctagaatt
tctgttaagcaggctctagaacacaggtactttacttctgcaccttctcctactgaccct
gctaagctcccaaagccacttcggaagcaggaaactaaagcctcttacggtaaacatgag
gctatcaaagtggtatcaccaccacgtaagattagaagagtaatacctgagcgtgggtgg
gttgatggtatgaagtctcacgttgacaaggatcaacaagcacccatgtcattagatttt
accgtcctcgctgagcggcctcctaaccgaccaaccatcaccagtgccgatagatctcat
ctgaagaggaagcttgatctcgatttctaa
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