Brassica napus (rape): 106371962
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Entry
106371962 CDS
T04128
Name
(RefSeq) phytoene synthase, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
bna
Brassica napus (rape)
Pathway
bna00906
Carotenoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
106371962
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106371962
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
106371962
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Squalene/phytoene synthase
106371962
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GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
106371962
NCBI-ProteinID:
XP_048598196
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Position
A10:14978786..14981833
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AA seq
424 aa
AA seq
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MSSVAVLWVASSSPNPDQMTTCGLVRAVESSRVLARCQNQRMDNGRRKQTTKTWTSSSSS
SLMSYRRSVVSSSVVASHAGEIALSSEEKVYNVVLRQAALVNKQLRSTSPELDDVKKPQD
IVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGP
NASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLRK
SRYKNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRD
VGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTE
LDAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKAKKIAALPLAYAKSVLKTPSS
RGTT
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtagcagtgttatgggttgcttcctcttctcctaatccagaccaaatgacc
acttgtgggttggtaagggctgtagaatcttctagagtgctcgctcgttgtcagaatcag
agaatggacaatggtaggaggaagcaaacaacaaaaacgtggacctcttcttcttcttcc
tctctaatgagctacaggaggagtgttgtgtcttcgagcgtagtagcaagtcatgcagga
gagattgccctctcatccgaagagaaggtttacaacgttgtgcttagacaagcggctttg
gtgaacaaacagctcaggtctacttctcctgaacttgatgatgtgaagaaaccacaggat
attgttctccctgggagtttgagtttgttgggtgaagcttatgatcgttgcggcgaagtt
tgcgctgaatatgctaaaaccttttatctcggaactttgcttatgacacctgagaggcga
aaggccatttgggctatctacgtttggtgcagaagaactgatgagctcgtagatgggccc
aatgcatcacacataacacccatggcgttagatagatgggaagcaaggttagaagatcta
ttccgtggccgtcctttcgatatgcttgatgctgctctcgctgataccgttgctagatac
cctgttgatattcagccatttagagacatgatcgaaggaatgagaatggatttgaggaag
tccagatacaagaactttgatgatctctacctttactgctactatgtagccggaaccgtc
ggtttgatgagcgttccggttatgggaatcgatcctaagtccaaagcaacgacagagagt
gtttacaacgctgccttggctctcggtatagctaatcagcttaccaacatactcagagac
gttggcgaagacgcgagaagaggaagagtttatctgccccaagatgagttagctcaagct
ggtctctcagatgaagacatattcgcgggaaaagtcactgacaaatggagaaacttcatg
aaaatgcagcttaagcgagcaagaatgttcttcgacgaagctgagaaaggcgttaccgag
ctcgacgctgctagtagatggccggtatgggcgtcgctcctattgtacaggagaatattg
gacgagattgaagcgaatgattacaacaactttacaaagagagcttatgttgggaaagcc
aagaaaattgcagctctgccattggcttatgctaaatcagtactaaagactccaagttca
agaggaacaacttaa
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