Brassica napus (rape): 106376431
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Entry
106376431 CDS
T04128
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bna
Brassica napus (rape)
Pathway
bna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106376431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106376431
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106376431
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106376431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Med27
Motif
Other DBs
NCBI-GeneID:
106376431
NCBI-ProteinID:
XP_013672001
UniProt:
A0A816UNF9
LinkDB
All DBs
Position
C8:39273562..39281552
Genome browser
AA seq
1640 aa
AA seq
DB search
MAQTTTEGASQVVESVRFSFMTEEDVRKHSVLQVTKPILLDNVGRPVPGGLYDPLMGPME
DDRSKCKTCDQRNLDCPGHCGRIELVRPIYHPLLFNLLFIFLQRTCFFCHHFMVKKEVVA
RCVSQLKLIMKGDVIAAKQLSLKPTDSSPGECEDSDMGKQRWTSLQFAEATDVINQFLRL
KSRKCESCKAKPPKLEKPIFGWVRLDGMSAIDIGANVMRGVKAKKSANSGEDSDDGDESG
ISGLHEVEDGAKKKKGKSSKAAKDYGDLKKASKRDLLPIEVKEILEGLWDNEYEFCSFIG
DLWKSGSEKMDYSMFFLGSVLVPPTKFRAPTKGGDSVTEHAHTAGLNKVLEANIALGNAC
TNKLGLSKIVSIWMNLQETVNVLFDSKTATVKSQREGTGICQLLEKKEGLFRQKMMGKRV
NHACRSVISPDPFIAVNDIGIPPCFALKLSYPERVTPWNVKKLRQAIINGPDVHPGATHY
SDRVSTMKLPPTKKARIAIARKLLSSRGVNTELGKTCDVNFECKTVYRHMQDGDVVLVNR
QPTLHKPSIMAHIVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRSEAYNIV
NANNQYARPSNGDPLRALIQDHIVSSVLLTKGDTFLDKEEFNQLLFSSGVTDMVLSSFSG
RSGKKVTQSASNAELLTVTPAILKPVPLWTGKQVITAVLNEITKGHPPFSVEKSTKLPVD
FFKCRTRETKSKSGESSKKSKKSDFNEDKLLIRKNEFVRGVIDKAQFADYGLVHTVHELY
GPNAAGNLLSVFSRLFTVFLQTQGFTCGVDDLIILKDVDEKRTEQLRECEGVGEKVLRKT
FGVDVNAQIDPQDMKSRIERVLYEDGELALASLDRSVVSELNQCSGKGVMNDLLSDGLLK
TPGTNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRA
GGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTV
RDADGSIIQFQYGEDGVDVHRSSFIEKFQEMTLNQDMFLERCSEDMLSGSSSYITDLPIT
LKKGAEKFVEAMPMKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPST
QMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTNDDASQITDKL
RKITVADIIKSMEVSVIPFAVHGGEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMTVT
FLRKLEDAIETHMKMLLRIRGIKIEKDNGPKSGNETDNDDSDSGKKTGGDDDDDDDEGED
TEADDLGADAQKRKKQATDEQDYEESDDDEKNEPSSVSGVVDPEMDDDEDEDGEVSKEDT
PEEDTLEAKKEVKNVQQENKKKKRQRFVSGEKDRHIFAEGKGKTFEVHFKFHKNEPHILL
AQVAQKTAQKVYIQNLGKIERCTVANCGDPQVIYYGDNPKERAEISNEEKKASPALHASG
VDFAGLWEFQDKLDVRYLYSNSIHDMLNTFGVEAARETIIREINHVFKSYGISVSIRHLN
LIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEVDRLETPSARIC
LGLPALTGTGCFDLLQRMDL
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaccaccacagagggagcttcccaagtggttgaatccgttaggtttagcttc
atgacagaggaagatgtccgaaagcacagtgttcttcaagttacaaaacccatcttgctc
gataacgttgggagacctgtccctggtggtctctatgatcctcttatgggtccaatggag
gatgatagatcaaagtgtaaaacgtgtgatcagcgcaatttagattgtccaggacattgt
gggcgtatcgagcttgtccgtcctatctaccaccctttgctgttcaatctccttttcatt
tttttgcagaggacatgtttcttctgccatcactttatggttaaaaaggaagtggttgca
aggtgcgtctctcagttgaaactcatcatgaaaggtgatgtgattgccgctaagcagctg
tctcttaaacccacagattcatcaccaggggaatgtgaagactctgacatggggaagcag
agatggacatctcttcagttcgctgaagccactgacgtaatcaatcagtttcttaggttg
aagtcaaggaagtgtgagtcttgcaaagcaaagcctcctaaactagagaagcctattttc
ggatgggttcgcttggatggtatgtcagcgatcgacattggagctaatgtaatgcgaggg
gttaaggctaagaagtccgctaacagtggggaagattccgatgacggtgatgagagtggt
atcagtggattacatgaagttgaagatggtgctaaaaagaaaaaaggaaagtcttcgaaa
gcagctaaagactatggagatctcaagaaggcttctaaaagagaccttttaccgattgag
gtcaaggaaatcttagaaggtttgtgggataatgagtatgagttttgctccttcattggt
gatctttggaagagtggatctgaaaaaatggactattctatgttctttttggggagtgtt
cttgtgcctcctactaaatttagagctccaacaaaaggaggtgatagcgttacggaacat
gctcacaccgcagggctaaataaggtcttggaagccaatatagcccttggaaatgcctgt
actaacaaattaggtctatccaagatagtttccatatggatgaatcttcaagaaacagtc
aatgtcttgtttgatagcaagactgccacagttaaaagccagagagagggtactggaata
tgtcaactgctggagaagaaagagggtctgtttcggcaaaagatgatgggaaagagagtg
aatcatgcttgcagatctgtgatatctccagatccttttatcgctgtcaatgacattgga
attcctccttgctttgctttgaaattgagctatcctgagagggtgactccttggaatgtt
aaaaagttaaggcaggctatcattaatggtcctgacgttcaccctggagcaacacactac
tctgacagagtatctacaatgaagctgcctcctaccaaaaaagcacgaatagcaattgca
agaaagctgctgtcctcacgaggagtcaatacagaacttgggaaaacttgtgatgtcaac
tttgaatgtaaaactgtctaccggcatatgcaagatggcgacgtcgtccttgtcaatcgt
cagccaacattacataaacctagtattatggctcacattgtccgtgttcttaagggggag
aaaacacttcgtctccactatgcaaattgcagtacatacaatgcagatttcgatggggat
gagatgaatgtccattttccacaagatgagatttcacgatctgaggcttacaatattgtc
aatgccaacaaccaatatgccaggccttctaatggtgatccacttcgagctttaattcag
gaccacattgttagttcggttttacttacaaaaggggacacctttttggacaaagaggaa
ttcaatcagcttctcttcagttccggcgtgactgacatggtgctcagttctttttctgga
cgatctggcaaaaaagtcacacaatcagcttctaatgcagagctgttgactgtcacgcct
gccattttgaaaccagtacctctttggacaggaaagcaggtcatcacggcagtgttaaat
gagataaccaaaggccatcccccattcagcgtagagaaatctacaaaacttccggttgac
ttcttcaaatgtagaacaagagaaacaaagtctaaaagtggagaatccagcaaaaagagc
aagaagagtgattttaatgaagataaactgctcatcagaaagaatgaatttgtccgcggt
gtgattgacaaggctcagtttgcggactatgggttggttcatacagtgcatgagctctac
ggtccaaatgctgcaggaaacctgctttctgtctttagtcgtctcttcacagtcttcctt
cagactcaaggtttcacctgtggagttgatgatcttattattttgaaagatgtggatgaa
aagaggacggagcaacttcgagaatgtgaaggggttggtgaaaaagtactccgtaagacc
tttggcgttgatgttaatgctcaaatagatcctcaggacatgaaatccagaattgagcga
gttctgtatgaggatggcgaacttgctttggcatctttggacaggagcgtcgtaagtgag
ctcaaccagtgttcaggcaagggggtgatgaacgatttgctctctgatgggttgttgaaa
acacctggaacgaattgtatctctctgatgacaatatctggggctaagggcagtaaggtt
aacttccagcaaatttcttctcaccttggccagcaagatttagaaggaaaaagagttccc
cgaatggtttcagggaagacactaccttgcttccatccatgggattggtcacctagagct
ggaggttttattagtgacagattccttagcggtcttcgcccccaagaatactactttcat
tgtatggctggacgagaagggttagttgatactgcagtgaagacatcacgtagtgggtat
ctacagagatgtttgatgaaaaatcttgagagcctgaaagtcaactatgattgtacagta
cgggatgctgatgggtccatcattcagttccaatatggtgaagatggcgtggatgttcat
cgatctagcttcattgaaaagttccaagaaatgacattaaatcaagatatgttccttgaa
agatgtagcgaagacatgctatctggatccagtagttacataactgatcttcctattacg
cttaagaagggagctgagaagtttgtagaggcaatgcctatgaaagaacgtattgcttct
aaaatggtgagacaagaagatcttctgaagctagtgaagtcaaaattctttgcaagtctc
gcccagccaggggagcctgtgggtgtacttgctgcacaatctgtaggagagccatcaaca
cagatgacgttgaatactttccatcttgctggacgtggagagatgaatgtgacacttggt
attccacgtttacaagagatcttgatgactgctgctgcagacattaagacacccatcatg
acctgcccgttgctgaagggcaaaacaaatgatgatgcaagtcaaatcactgataagttg
aggaagattaccgtagcagatattatcaagagtatggaagtgtccgtcataccatttgca
gttcatgggggtgaagtttgcagtattcacaagcttaagatcaatctatacaagccagag
cattatccaaagcacactgatattaccgaagaagactgggaagagacaatgacggtcacg
tttctgaggaagctggaagacgctatagagactcacatgaaaatgctcttgagaatcagg
ggcataaagattgagaaagacaacggtccaaaatccggaaacgaaacggataatgatgat
tccgatagtggaaagaagactggaggtgatgatgacgatgatgatgatgagggagaggat
acagaggctgatgatcttggtgcagatgcacagaaacggaagaagcaagcaacagatgag
caggattatgaggagagtgatgacgatgagaagaatgaaccgtcttcagttagtggagta
gttgaccctgagatggatgatgatgaagatgaggacggagaagttagcaaggaagatacc
ccggaggaagataccttggaagcgaagaaagaggtgaagaatgttcaacaagagaataaa
aaaaagaagagacaaagatttgtcagtggtgaaaaagacagacacatctttgctgaaggc
aaaggaaagacatttgaggtccacttcaagtttcataaaaatgagcctcatatattactt
gctcaggttgctcaaaaaacagcgcagaaagtttacatccagaaccttgggaagatcgaa
cggtgcacggtagctaactgtggtgatcctcaagtgatatactacggagacaatccaaag
gagagagcagagatctccaacgaagaaaagaaagcctcaccagctctccacgcatcagga
gttgattttgctggtctctgggagtttcaagacaagcttgacgtcaggtacttgtacagc
aacagcatccacgacatgctcaacacttttggagttgaagcagctagagagacgatcatc
agggagataaaccacgttttcaaatcgtacggtatctcagttagcatcaggcacttgaac
ctcatcgcggattacatgacgttctctggtgggtaccgtccaatgagccgtatgggagga
attgcagaatcaacttctccgttctgcagaatgacgtttgagacggccactaagtttatt
gttcaagcagctacttatggagaagtggataggcttgaaactccctcagctagaatatgt
cttggcttgcccgctcttacgggaacaggttgcttcgacttgttgcagagaatggatctc
tga
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integrated database retrieval system
