Brassica napus (rape): 106376844
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Entry
106376844 CDS
T04128
Name
(RefSeq) pyridoxal 5'-phosphate synthase-like subunit PDX1.2
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
bna
Brassica napus (rape)
Pathway
bna00750
Vitamin B6 metabolism
bna01100
Metabolic pathways
bna01240
Biosynthesis of cofactors
Module
bna_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
106376844
Enzymes [BR:
bna01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
106376844
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
His_biosynth
ThiI
DHO_dh
Motif
Other DBs
NCBI-GeneID:
106376844
NCBI-ProteinID:
XP_013672424
UniProt:
A0A816RVA5
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Position
C1:44036690..44037963
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AA seq
308 aa
AA seq
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MADHDQGAVTLYSGTAITDAAKKNHPFSVKVGLAQVLRGGAVVEVSSVNQAKIAESAGAC
AVLISDPPRSPATAGVQRMPDPALVKEVKRAVSVPVMARARVGHFVEAQILEHLAVDYID
ESEIISVADEGNFINKHNFRSPFICGCRDTGEALRRIREGAAMIRIQGDVTRTGNVAETV
RNVRRVMGDVRVLNNMDDDEVFAFAKKLSAPYDLVAQTKQMGRVPVVQFASGGITTPADA
ALMMQLGCDGVFVGCEVFEGTDPFKRVRSIVQAVQHYNDPHVLAEMSSGLESAMESLSVS
GDRIQGSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcatgaccaaggcgccgtgactctctacagcggcacagccatcaccgacgcc
gccaagaaaaaccatcccttctccgtcaaagtcggcttagctcaagtcctccgcggcggc
gccgtcgttgaagtctcctccgtaaaccaagccaagatcgccgagtccgccggcgcatgc
gccgtcctcatctcggatccgccccgatccccagccaccgccggcgtccagcgcatgccg
gatccagccctcgtcaaagaagtgaaacgcgcggtgtccgtccccgtgatggcacgcgcg
cgcgtcggtcatttcgtggaagctcagatcctggagcatctcgccgttgactacatcgac
gagagcgagatcatctcggttgcagacgaaggtaacttcatcaacaagcataacttccga
tctccgttcatatgcgggtgccgcgacaccggtgaggccttgaggaggatcagagaagga
gccgcgatgattcggatccaaggagatgttacaagaacagggaacgttgcggagactgtg
aggaacgttaggagagtgatgggtgacgttagggttctgaacaacatggatgacgatgag
gttttcgcgtttgcgaagaagttgtctgcgccgtacgatctcgtggcgcagacgaagcag
atggggagggttccggttgtgcagtttgcgtctggtgggatcacgactcctgctgatgcg
gctttgatgatgcagttggggtgtgatggggtttttgtgggttgtgaggtttttgagggg
acggatccgtttaagagagtgaggagtattgttcaggctgttcagcattataatgatcct
catgtgttggctgagatgagctctgggctggagagtgcgatggagagcttgagtgtgagt
ggtgacaggattcaaggaagtgtttga
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