Brassica napus (rape): 106389564
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Entry
106389564 CDS
T04128
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
Module
bna_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106389564
Enzymes [BR:
bna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
106389564
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
106389564
NCBI-ProteinID:
XP_013685304
UniProt:
A0A078FEQ7
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Position
C3:56504059..56507872
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AA seq
544 aa
AA seq
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MDSLSYSSVKSMLIQARGSLNSRLSEFEPLALLFAPLLTLFLAQVIGSVLGVVHEKGLKA
CLLGFIMGFLKMIPGVQSYIDAEKQKVVDQLQSGGSSKKNNWAKELPVKGLGVQVLEKME
TEKRNDPTWQGKCSGTVYIGGNESEGHFTLINQACSMFAHTNPLHIDVFQSVVRFESEVV
AMTAALLGSKETVSGEQICGNMTSGGTESIVLAVKSSRDYMKSKKGIKRPEMIIPESGHS
AYDKAAQYFNIKLWRVPVGKDFRADVKAMRRHINRNTIMIVGSAPGFPHGIIDPIEELGQ
LALSYGICFHVDLCLGGFVLPFARKLGYQIPAFDFSVQGVTSISIDVHKYGLAPKGTSTV
LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLENTSKIM
EASKRLEEGVRGISELFVVGKPDMTIVAFGSKSLDIFEVNDIMSSKGWHLNALQRPNSIH
ICVTLQHVPVVDDFLQDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFM
DSQY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggattctttatcatattcttcggtgaaatctatgttgatccaagctcgaggctcgcta
aactcgcgtttgtcggagtttgagcctctggctcttctctttgccccgcttctcactctc
tttctagctcaggttatcggatctgtgttgggcgttgtccacgagaaaggcctgaaagca
tgtcttctggggtttatcatgggcttcctcaaaatgattcctggagtacaaagctacata
gatgcagagaaacaaaaggttgttgatcagttacaatctggtggcagctctaagaaaaat
aactgggctaaagaactgccagtaaaaggtctaggtgtccaagttctagagaaaatggag
actgagaagagaaatgatcctacttggcaaggaaaatgctctggcactgtatacataggt
ggaaacgagtctgaaggacattttacattgataaatcaagcatgttcaatgtttgcgcat
accaatccgttgcacatagacgtattccagagtgtggtgaggtttgaatcagaagtagtc
gcaatgactgctgccttactcggaagcaaagaaacggtttcaggggaacagatatgcgga
aacatgacgtctggaggaacagaaagcatagtgttggctgtgaagtcatctcgtgactat
atgaagtccaagaagggaatcaaacgaccagaaatgattatacctgagtcgggtcactcg
gcttatgataaggcggctcagtatttcaacatcaagttgtggcgagttccagtaggcaaa
gacttccgagccgatgtgaaggcaatgaggaggcatataaacagaaacaccatcatgatt
gttggatcagcaccaggattccctcatggcatcattgatcctattgaggagcttggtcaa
ctggctcttagctatggaatatgctttcatgttgacctttgccttggtggttttgtgtta
cctttcgctcgaaagcttgggtaccagatcccagcttttgatttttctgtacaaggagtc
acttcaatttccattgatgtgcataaatatggtttggctcctaaaggaactagtacagtt
ctctacagaaaccatgagatcagaaagcaccaatttgttgctgtaactgaatggtcagga
ggactatatgtgtctccaactatagcagggagtaggcctggttctctggttgctggtgct
tgggctgcaatgatgtctctcggcgaagaaggctatctagaaaacacaagcaagataatg
gaagcatcaaaaagactagaggaaggtgtaaggggaatcagtgaactgtttgtcgttgga
aagccagatatgaccatcgtggcgtttggttctaaatcattagatatctttgaagttaat
gacatcatgtcttcaaaaggttggcatttgaatgcactgcagagacccaacagcatccat
atatgtgtaactcttcaacacgtccctgtggtggatgacttcctccaggatctgcgtgaa
gctgtagaaactgtgaaagcaaacccaggaccgatcacaggaggattggctccaatatat
ggagcagcagggaagatgccggaccgagggatggtgaatgagcttcttgttagtttcatg
gacagtcagtactaa
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