Brassica napus (rape): 106392118
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Entry
106392118 CDS
T04128
Name
(RefSeq) malate dehydrogenase 1, peroxisomal
KO
K00026
malate dehydrogenase [EC:
1.1.1.37
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00270
Cysteine and methionine metabolism
bna00620
Pyruvate metabolism
bna00630
Glyoxylate and dicarboxylate metabolism
bna00710
Carbon fixation in photosynthetic organisms
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bna_M00012
Glyoxylate cycle
bna_M00168
CAM (Crassulacean acid metabolism), dark
bna_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106392118
00620 Pyruvate metabolism
106392118
00630 Glyoxylate and dicarboxylate metabolism
106392118
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
106392118
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
106392118
Enzymes [BR:
bna01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
106392118
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
3Beta_HSD
Semialdhyde_dh
Epimerase
DapB_N
DUF6245
Motif
Other DBs
NCBI-GeneID:
106392118
NCBI-ProteinID:
XP_013688349
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All DBs
Position
C4:complement(48496691..48499928)
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AA seq
353 aa
AA seq
DB search
MDANQRIARISAHLNPPNLDQIGSGSGLERVGCRAKGGSPGFKVAILGAAGGIGQPLAML
MKMNPLVSLLHLYDVANAPGVTADISHMDTSAIVRGFLGQSQLEEALTGMDLVIIPAGVP
RKPGMTRDDLFKINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDP
KKLMGVTMLDVVRANTFVAEVMSLDPREVDVPVVGGHAGVTILPLLSQVKPPCSFTQKEI
EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLKGLRGDANIVECAFVASHVT
ELPFFASKVRLGRCGVDEVYGLGPLNEYERMGLEKAKKELEGSIVKGVTFVKK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaccagcgtatcgcgagaatctctgcgcatctcaaccctcccaatctcgat
cagattggttccgggtcgggtcttgaacgggtgggttgcagggcgaaaggcgggtcgccc
ggtttcaaagtggcgatactgggagcagcgggagggatagggcagcctctggcgatgttg
atgaagatgaatcctttggtgtcgcttcttcatctctacgacgttgcgaatgctcctggt
gtcaccgctgatattagtcacatggacactagtgccatcgttcgtggatttctcgggcaa
tcgcagttggaggaagcacttacgggtatggatctagtgatcataccagctggtgttccg
aggaagccagggatgaccagggatgatcttttcaaaatcaacgctggcatcgttaggaca
ctctctgaagctatagccaagtgctgtcccaaagcgattgtgaatatcatcagtaatccg
gtgaactctaccgtgccaatcgcagccgaggttttcaagaaagctggcacttttgatcca
aagaaacttatgggcgtcaccatgctggatgttgttagagctaatacttttgtggcggaa
gtaatgagtcttgatcctcgagaagttgatgttccagttgttggaggacacgcaggagtt
acaatcttgcctctgctttctcaggtgaaacctccttgctctttcacgcaaaaagagatt
gaatatctcacagaccgcatccaaaatggtggcactgaagttgtcgaggcgaaagctggt
gcaggttctgcaacactatccatggcttacgcagccgtgaagtttgcagatgcttgcctc
aagggtctacgaggcgatgcaaacatcgtcgagtgtgcatttgtggcatctcatgtgact
gagcttcccttcttcgcatcaaaggtgcgtctaggaagatgtggggtcgatgaagtgtac
ggtctcggaccattgaatgaatacgagaggatgggactggagaaggcaaagaaagagctt
gaagggagtattgtgaaaggggttacctttgtgaagaagtaa
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integrated database retrieval system