KEGG   Brassica napus (rape): 106401865
Entry
106401865         CDS       T04128                                 
Name
(RefSeq) lysine-specific demethylase JMJ30 isoform X1
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106401865
Enzymes [BR:bna01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     106401865
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106401865
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2
Other DBs
NCBI-GeneID: 106401865
NCBI-ProteinID: XP_013697929
UniProt: A0A816L622
LinkDB
Position
C5:complement(41713459..41715709)
AA seq 414 aa
MSGAPTAASSGNHSLHLPTPTLDAESQSLLQSISAQGGYAYARMAALAVAGDQSAAEAAR
DMAWEQLHSGPWHSVLPVWRDAYSMACLHVAKFHFAAGEFGEALGALDMGLIMGGTLLRK
DLHDSVLLVSSEARKMAKSLGDFKGEKLVPEVPVDVSEVLKILPMRSLTSGRVEKRCDLS
MEGFLRDYFQTGTPVVITNCMAHWPARTKWNHLDYLTSVAGNRTVPVEVGKNYLCSDWKQ
ELVTFSKFLERMRTNRSTSVEPTYLAQHPLFDQINELRDDICIPDYCFVGGGDLQSLNAW
FGPAGTVTPLHHDPHHNILAQVVGKKYVRLYPSSLQDELYPYPETMLCNSSQVDLDNIDK
NEFPKAVELEFMDCILEEGEMLYIPPKWWHYVRSLTMSFSVSFWWSNEAESSDS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtcaggagctccaaccgccgcttcctccggaaaccacagcctccatctcccgactcca
accctcgacgcggagtcgcaatccctgctgcagtcgatctccgctcaaggcggttacgcc
tatgctcgcatggcggcgctagcagtcgccggcgaccaaagcgcggcggaggcggcgcgt
gatatggcctgggagcagcttcactccggtccctggcactctgttctccccgtctggcgc
gacgcttactcgatggcttgtctccacgtcgccaagttccatttcgccgccggcgagttt
ggggaagctctcggcgcgctcgatatgggtctcatcatgggagggacgcttctccgcaag
gacctccacgactctgtgctcttggtctcctctgaagctcgtaagatggctaagagcctc
ggagatttcaagggtgagaagttggtccctgaagttcccgtcgatgtcagtgaggtgcta
aagattctacctatgaggtcattgactagtggaagggtagagaagaggtgtgatttatct
atggaggggtttcttcgtgattattttcagacaggtacacctgttgttataaccaattgt
atggctcattggccagctaggaccaagtggaaccacttggactatctcacttctgttgct
ggtaaccgtaccgttcccgtcgaggtggggaaaaactatttgtgttcagattggaagcaa
gagcttgtgactttttccaagttccttgaacggatgaggaccaatagatccacctccgtg
gaacctacttatcttgctcagcatccgttgtttgatcagataaatgaactgagagatgat
atatgtattcctgattactgttttgtcggtggaggggatctccaatctcttaatgcttgg
tttggtccggctgggacagttactcctttacaccatgatccacatcataatatacttgct
caggttgttggcaagaagtatgtaaggctttacccatcctcgttgcaagacgaactttac
ccttatcctgagacaatgctttgcaactctagccaggttgatcttgacaacatcgacaag
aacgagtttccaaaggcggtggagctagagtttatggattgtatcctagaggaaggagaa
atgctgtacatccctcccaaatggtggcactatgtcaggtctttaacaatgagtttctcg
gttagcttctggtggagcaatgaagcagagtcctctgattcttag

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