Brassica napus (rape): 106404872
Help
Entry
106404872 CDS
T04128
Name
(RefSeq) (R)-mandelonitrile lyase-like isoform X1
KO
K08248
(R)-mandelonitrile lyase [EC:
4.1.2.10
]
Organism
bna
Brassica napus (rape)
Pathway
bna00460
Cyanoamino acid metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
106404872
Enzymes [BR:
bna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.10 (R)-mandelonitrile lyase
106404872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
Pyr_redox_2
NAD_binding_8
DAO
Lycopene_cycl
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
106404872
NCBI-ProteinID:
XP_013700979
UniProt:
A0A078J8A5
LinkDB
All DBs
Position
C6:complement(44429233..44431475)
Genome browser
AA seq
554 aa
AA seq
DB search
MSKRMDRYLLYTVVLLLLLLGAASLSNARPRANRPPNFMRFVTNATDFASEDYYDYIIVG
GGTAGCPLAATLSQSFRVLLLERGGVPYNRPNVMSHDGFLTTLTDVNSFDSPAQSFVSEE
GVPNARGRVLGGSSAINAGFYSRADKQFFDNSGLDWDLTTVNQSYEWVERAIVFRPQLRT
WQSAIRDALLEIGVHPFNGFTLEHKVGTKIGGSTFDRAGRRHSSADLLRYARNSNIRVAV
YATVERVLLASSSPSDSGCNVSAIGVVYRDQLGRYHHAMIRDRGEVILSAGSLGTPQLML
LSGIGPRSYLSTWGIPVALDLPNVGDFVYDNPRNGISIVPPVPMENSLIQVVGITEEGAF
LEAASTVIPFASPLRSVFIRAPASPLYVPVTTIMEKILGPVSVGSLRLASTDVRINPVVR
FNYFSDPQDLERCVNGTRKIGEILRSRAMQDFMFREWFGSRRFRFVGVPLPLDQSNDLVM
ADFCRRTVSTIWHYHGGCVVGKVVNSDLKVNGVDSLRIVDGSTFSISPGTNPQATLMMLG
RYMGLQMLRERMRY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggatggatcgttatcttctttacacggtggtgcttcttcttcttcttctc
ggagcagcttctctctccaacgcaaggccacgcgctaatcgacctcccaacttcatgcga
ttcgtgacgaacgcaaccgacttcgcgtcggaggattactacgactacataatcgtcggc
ggcggaacggcgggatgtccactcgccgccacgctctcccaatccttccgcgtcctcctc
ctcgagcgcggcggcgtcccttacaacagacccaacgtgatgtcgcacgacggtttcttg
acgacactcaccgacgtcaacagcttcgactccccggctcagtccttcgtctccgaggaa
ggagtccccaacgctagaggccgcgttctcggaggaagcagcgcgatcaacgccgggttc
tacagccgagctgataaacagttcttcgacaactcgggtctcgattgggatctcacgacg
gttaatcagtcttacgaatgggtggagcgagctattgtctttagacctcagctgaggacg
tggcagtccgcgattagagacgcgttgcttgagatcggtgtgcatccgtttaacggcttc
acgttggagcataaagttgggactaagatcggtggttcgacttttgatcgtgctgggagg
agacacagctctgcggatcttcttaggtacgcaagaaactccaacattagagtagcggtt
tacgctactgtggagagagtgttgctagcttcttcgtctccgagtgattcgggttgtaat
gtctctgctattggagttgtgtaccgtgatcagcttggacgttaccatcacgcgatgata
cgagacagaggagaggtgatactctctgctggctcgctcggtactccgcagttgatgctt
cttagcgggattggtccaaggagttacctttcgacttgggggatccctgtggctcttgac
ttgcctaatgtgggggactttgtgtatgataacccgaggaacggtatctccattgttcca
ccggttccaatggagaactcgctgatacaggtagtgggtattactgaggaaggtgctttt
cttgaagctgcttccactgtaatcccctttgcgtcgcctctacgttctgttttcataaga
gctccagcttctcctttgtacgttcccgtgacaactataatggagaagattctcggtcca
gtttctgttggttcgctaaggttggcttcgactgatgtgaggattaaccctgttgttagg
ttcaactacttcagtgacccacaggatcttgagaggtgtgtcaatgggactaggaagatt
ggggagatactaaggagcagagctatgcaggacttcatgttcagggaatggtttgggagc
cgtaggtttaggttcgttggagttccattacctttggaccaatcaaatgatctggtgatg
gcagatttctgcagacgtactgtgagcacgatctggcattaccatggtggatgcgttgtg
gggaaagtagtgaactctgatctcaaagtcaatggtgttgattctcttagaatcgtggat
ggatcaaccttcagtatctctccagggactaatccacaagctaccttgatgatgcttgga
aggtacatggggctgcagatgctgagagagagaatgagatactaa
DBGET
integrated database retrieval system
