Brassica napus (rape): 106405405
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Entry
106405405 CDS
T04128
Name
(RefSeq) beta-galactosidase 17-like isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
bna
Brassica napus (rape)
Pathway
bna00052
Galactose metabolism
bna00511
Other glycan degradation
bna00531
Glycosaminoglycan degradation
bna00600
Sphingolipid metabolism
bna00604
Glycosphingolipid biosynthesis - ganglio series
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
106405405
09103 Lipid metabolism
00600 Sphingolipid metabolism
106405405
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
106405405
00604 Glycosphingolipid biosynthesis - ganglio series
106405405
00511 Other glycan degradation
106405405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106405405
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
106405405
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106405405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
106405405
NCBI-ProteinID:
XP_048616019
LinkDB
All DBs
Position
C6:34751897..34756811
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AA seq
705 aa
AA seq
DB search
MLDQAYFCRRGTMAKISRPSTGRHHLAFVLLLFLVAVGICVPVFALLPSLSSHQSLPPAL
PRDEKMMSRKFYIKDDMFWKGENPFQIIGGDLHYFRVLPEYWEDRLMRAKALGLNTIQTY
VPWNLHEPKPGKMVFQGIADLVSFIKLCQKLDLLVMLRAGPYICGEWDLGGFPAWLLAVK
PPLKLRAADPAYLKLVERWWNVLLPKIFPLLYSNGGPVIMVQIENEYGSYGNDKAYLRNL
VTMATGHLGNDIILYTTDGGTRETLEKGNAPLYDVYSAVDFSTGDDPWPIFELQKKFNAP
GRSPPLSSEFYTGWLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYSG
ANTGSEEFDYKPDLTSYDYDAPIKESGEIDNPKFKALQRVIKKYSAAPHTTTPSNTKRKA
YGPIKMQRKISLFDLMSMTDPVDVITSTNPISMESAGQMFGFLVYESSYISKKSGNILRI
PKVHDRAQVFVSCLSQDVDGGVLRYIGTTERWNNQPVSIPTTECASNTSLFILVENMGRV
NYGPYIFDEKGILSPVYLDGEILHGWKMIPIPFHNLNQMPHFSFKMQHAKKSSENLEVTN
DVGQKEPALFAGEFSINSVEEIKDTYLSFNGWGKGVAFVNKFNIGRYWPSVGPQCNLYVP
APLLKPGRNSVVIFELESPHVDLLLRSVDQEDFTCGSNYSKVNQL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcaagcttacttttgtagaagagggacgatggcgaagataagcaggccatca
acaggaagacatcatttggctttcgtgttgcttctctttcttgtggctgtcggaatctgt
gttcctgtcttcgctcttcttccttcactctcctctcatcagtctctgcctcctgcgcta
cctcgagacgagaagatgatgtctcggaaattttatataaaagatgacatgttttggaaa
ggtgagaatcctttccagatcattggtggtgatttgcactacttccgagttcttcctgag
tactgggaagataggcttatgagagccaaggctttaggtctgaatactatacaaacgtat
gttccttggaatctgcacgaaccaaagcctgggaagatggtctttcagggcattgctgat
cttgtgtcctttatcaagctttgtcagaaactagatttgctggttatgctccgtgctgga
ccttatatctgtggagaatgggatttgggcggttttcctgcttggttacttgctgtgaaa
ccacctctcaaactgagggcagcagatcctgcataccttaagttggttgaaagatggtgg
aatgttctattgccaaagatatttcctctgctttacagcaacgggggtcctgttataatg
gttcagattgaaaatgaatatgggtcatatggaaatgacaaagcttatcttcgtaatcta
gtgactatggctacgggacacctggggaatgacattattctctatacaaccgatggtggt
acaagagaaacacttgagaaaggaaatgcccccttatatgatgtctactcagctgtggat
ttctcaacgggtgatgacccttggccaatatttgaattgcaaaagaagtttaatgctcca
ggaagatcacctccactttcttcggagttctatactggttggcttacgcattggggcgag
aagattgcaaaaacagatgccgaatttacagcagcttcacttgaaaagatattatccaga
aatggttcagctgtgctatatatggtgcatggaggaacaaactttggtttctacagtgga
gcaaatactggctctgaagaatttgactacaaaccagatctgacttcctatgattatgat
gctcccattaaggagtctggtgagatagataatccaaaattcaaagctctccagagagtg
attaagaagtacagtgctgcacctcacaccactaccccctccaataccaaacggaaagcg
tatggcccaatcaagatgcagaggaaaatatctctgtttgatttgatgagtatgacagat
cctgtagatgtgatcacttccaccaacccaatttcaatggaatctgctggacagatgttc
ggatttcttgtatatgaatcttcatacatttccaaaaagagtgggaatatcctaagaata
cccaaggttcatgacagagctcaagtgtttgtttcatgcctttcccaagatgttgatggg
ggagtactgagatacattggtacaactgagagatggaacaaccaacctgtttctattcca
actactgagtgtgcctctaacactagcttatttattctggttgaaaacatgggtcgtgta
aattacgggccatatatctttgatgagaagggtattctgtctccggtttatctagatggt
gaaattctccatggatggaagatgataccaattcctttccataacttgaatcaaatgcca
catttcagtttcaagatgcaacatgccaaaaagagtagtgagaaccttgaggttactaat
gacgtgggtcaaaaggaaccagctctgtttgctggtgagttctctatcaacagtgtagaa
gaaatcaaagacacttatctatcattcaacggttggggcaaaggagttgcgtttgtcaat
aaattcaacatcggaagatattggccatctgttggaccacaatgcaacctctacgttcct
gcgccactcctgaagcctggcagaaactctgtggtgatctttgagttggaatctccacat
gtcgaccttttgcttcggtcagtggatcaggaagacttcacatgcggttcaaattattcc
aaagtcaatcagttgtag
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