Brassica napus (rape): 106407681
Help
Entry
106407681 CDS
T04128
Name
(RefSeq) phosphoenolpyruvate carboxykinase (ATP) 1-like isoform X1
KO
K01610
phosphoenolpyruvate carboxykinase (ATP) [EC:
4.1.1.49
]
Organism
bna
Brassica napus (rape)
Pathway
bna00010
Glycolysis / Gluconeogenesis
bna00020
Citrate cycle (TCA cycle)
bna00620
Pyruvate metabolism
bna00710
Carbon fixation in photosynthetic organisms
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
Module
bna_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
bna_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
106407681
00020 Citrate cycle (TCA cycle)
106407681
00620 Pyruvate metabolism
106407681
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
106407681
Enzymes [BR:
bna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.49 phosphoenolpyruvate carboxykinase (ATP)
106407681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEPCK_ATP
Motif
Other DBs
NCBI-GeneID:
106407681
NCBI-ProteinID:
XP_013704004
LinkDB
All DBs
Position
C7:complement(54378206..54387092)
Genome browser
AA seq
582 aa
AA seq
DB search
MSAGNGNANGDGGFSFPKGPAIPKITTGAKRDNEICHDDSGPTVKATTLDELHSLQKKRS
APTTPINQSGAAFSEEERQKIQLQSISASLASLTRESGPKVVRGDPAEKKADGSTTPAYA
HGQHPSIFSPALGAVSDSSLKFTHVLYNLSPAELYEQAVKYEKGSFITSNGALATLSGAK
TGRAPRDKRVVRDATTEDELWWGKGSPNIEMDEHTFTVNRERAVDYLNSLEKVFVNDQFL
NWDPENRIKVRIVSARAYHSLFMHNMCIRPTPEELESFGTPDFTIYNAGQFPCNRYTHYM
TSSTSVDLNLSRREMVILGTQYAGEMKKGLFSVMHYLMPKRRILSLHSGCNMGKDGDVAL
FFGLSGTGKTTLSTDHNRYLIGDDEHCWTETGVSNIEGGCYAKCVDLSREKEPDIWNAIK
FGTVLENVVFDEHTREVDYSDKSVTENTRAAYPIEFIPNAKIPCVGPHPKNVILLACDAF
GVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAML
AEKMKRQGATGWLVNTGWSGGSYGVGNRIKLAYTRKIIDAIH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggtaatggaaacgcaaacggtgacggagggtttagcttcccgaaaggacca
gctataccaaagataacgacgggagctaaaagggataacgaaatatgccacgatgacagt
ggtccgactgtgaaggcgacgacgctcgatgagcttcactctttacagaagaagcgttct
gctcccaccactcctattaaccaaagcggcgctgccttctccgaggaggaacgccagaag
attcagcttcagtctatcagtgcatcgttggcgtcgctgacgagagaatctggacccaaa
gtggtgagaggagacccggcggagaagaaggccgacggttccactactccggcgtacgca
cacggccagcatccttccatcttctctccggcgttgggagctgtaagtgatagctccttg
aagttcacccacgtcctctacaacctttctcccgcagagctctacgagcaagctgtcaag
tacgagaaaggttcgttcatcacttccaatggagctttggctacgctttccggtgctaaa
actggtcgtgctccgagggataagcgtgtcgttagagatgcgactacagaggacgagctt
tggtggggaaagggctcgccgaatatcgaaatggatgaacatacattcacggtgaacaga
gaaagagccgttgattacttgaactccttggagaaggtgtttgtgaatgatcagttcttg
aactgggacccggagaacagaatcaaagtcaggattgtctcagctagagcttaccattca
ctcttcatgcacaacatgtgtatccggccaacaccggaggagcttgagagcttcggtact
ccggacttcactatatacaacgctggacagtttccgtgtaaccgttacactcactacatg
acgtcatccactagcgtagacttgaatcttagcaggagggaaatggttatactcggcact
caatatgctggtgagatgaagaagggacttttcagtgtgatgcattaccttatgcctaag
cgtcggattctctcccttcactctggttgcaatatgggaaaagatggagatgttgctctc
ttctttggactttcaggtaccgggaagacgacgctgtctactgatcacaacaggtatttg
ataggagatgatgagcattgttggactgagactggtgtttcgaacattgagggtggatgc
tatgctaagtgcgttgatctttcgagggagaaggagcctgatatttggaacgccatcaag
tttggaacagttttggaaaatgttgtgtttgatgaacataccagagaagttgattactct
gataaatccgttacagagaacacacgtgctgcataccctattgagttcattccaaacgcg
aaaataccgtgcgttggtccacacccgaaaaacgtgattcttctggcatgtgacgccttt
ggtgttctcccgcctgtgagcaagcttaatcttgcacaaaccatgtaccacttcatcagt
ggttacactgctctggttgcgggcacggaggacggcataaaggagccaacagcaacattc
tcagcatgctttggtgcagctttcataatgttgcatccaacaaagtatgcggctatgtta
gccgagaagatgaagaggcaaggcgctactggatggctcgttaacactggttggtccggt
ggcagctacggtgttggaaacaggatcaagctggcgtatactaggaagatcatcgatgca
atccattaa
DBGET
integrated database retrieval system
