Brassica napus (rape): 106417124
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Entry
106417124 CDS
T04128
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106417124
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106417124
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106417124
03036 Chromosome and associated proteins [BR:
bna03036
]
106417124
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106417124
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106417124
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106417124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
HEAT_EZ
PDS5
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
106417124
NCBI-ProteinID:
XP_022562237
LinkDB
All DBs
Position
C9:complement(26108594..26112239)
Genome browser
AA seq
471 aa
AA seq
DB search
MRESDLVDHFLPLVKRLAAGEWFTARVSACGLFHIAYPSAPDTLKTELRSIYSQLCSDDM
PMVRRAAATNLGKFAATIGSAHLKTDIMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQ
DCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDSEAEV
RIAAAGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATI
EHLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLA
IIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIRDAAANNLKRLAEEFGPEWAMQHI
VPQVLEMINNPHYLYSMTILRAVSLLAPVMGSEITCSKLLPVVITASKDRVPNIKFNVAK
VLQSLIPIVDQSVVENMIRPGLVELSEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagtgacttggttgatcatttcttaccattggttaagagacttgcagctggg
gagtggttcacagccagagtttcagcttgtgggcttttccatattgcatacccaagcgcc
ccagatacgttgaagaccgagttaagatcaatatatagccagctctgttcagatgatatg
ccaatggtgcggagagctgcagcaaccaacctgggaaagtttgctgctactattggatca
gcgcatttgaagactgacattatgtctatgtttgatgatcttactcaagatgatcaagat
tcggttagattattggccgttgagggttgtgctgctcttgggaaattgttggagccgcag
gattgtgtcgcacacattcttcccgtgattgttaatttctctcaggacaagtcctggcgt
gtgcgttatatggttgcaaatcagctctatgagctttgcgaagctgtgggacctgagcct
actaggacggagctggtgcctgcatatgtgcgtctactccgtgacagtgaggctgaagta
cgcatagcagctgctggaaaagttaccaagttctgtcggatcctaaaccctgaacttgct
attcagcacattctcccctgtgtgaaggagctatcatctgactcttctcagcacgtcagg
tctgcattggcctcagttataatgggaatggctccagtcctgggtaaggatgcaacaatt
gagcatctccttccaatctttctttctctcttgaaagatgagtttccagatgtacgcttg
aacattatcagcaaacttgaccaagtgaatcaggttattgggattgatctactgtcacag
tccttgttgccagcaattgtggaacttgctgaagatagacactggagagtaagacttgct
ataatcgagtatatccctttgttagcaagtcagttaggtgttggcttctttgacgataag
cttggcgctctttgcatgcaatggttacaagacaaggttcactcgatccgtgatgctgct
gcaaacaatctgaagcggcttgctgaggagtttggtcctgaatgggcaatgcaacatata
gttcctcaggttcttgagatgattaacaaccctcactatctatacagtatgaccattttg
cgtgcggtttctcttcttgcaccagtgatgggctcagagatcacatgctctaaactcttg
cccgtggtaatcactgcatctaaagacagagttccaaacatcaaattcaatgtcgctaaa
gtgcttcagtccctcattccaatagtggatcaatcagttgtagagaatatgattcgtcca
gggcttgtggagctaagcgaggatccagatgttgatgtaaggttttttgcaaaccaagct
cttcaatctattgataatgtgatgatgtctagctaa
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