Brassica napus (rape): 106418278
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Entry
106418278 CDS
T04128
Name
(RefSeq) beta-galactosidase 2
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
bna
Brassica napus (rape)
Pathway
bna00052
Galactose metabolism
bna00511
Other glycan degradation
bna00531
Glycosaminoglycan degradation
bna00600
Sphingolipid metabolism
bna00604
Glycosphingolipid biosynthesis - ganglio series
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
106418278
09103 Lipid metabolism
00600 Sphingolipid metabolism
106418278
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
106418278
00604 Glycosphingolipid biosynthesis - ganglio series
106418278
00511 Other glycan degradation
106418278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106418278
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
106418278
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106418278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
GHD
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
106418278
NCBI-ProteinID:
XP_013714400
UniProt:
A0A816JKN2
LinkDB
All DBs
Position
C4:complement(38123050..38129473)
Genome browser
AA seq
727 aa
AA seq
DB search
MVINFRDKAWIFLAIMCFSLLICSTKALVSYDHKALIINGQKRILLSGSIHYPRSTPEMW
PDLIKKAQEGGLDVIQTYVFWNGHEPSPGQYYFGDRYDLVRFIKLVQQAGLYVSLRIGPY
VCAEWNFGGIPVWLKYVPGMVFRTDNGPFKTAMQKFTKKIVDIMKEEKLFETQGGPIILS
QIENEYGPMEWEIGSAGKAYTKWTAAMALGLSTGVPWVMCKQDDAPYPIINTCNGFYCEG
FKPNSVDQPKMWTENWTGWFTEFGGAIPNRPVEDLAFSVARFIQNGGSFMNYYMYHGGTN
FDRTSGEFITTSYDYDAPLDEYGLLREPKYSHLKELHKVIKLCEPALVSVDPTINSLGNK
QEAHVFKSKTSCAAFLSNYDTSYAAKVMFRGFPYDLPPWSISILPDCKTEYHNTAKIRSP
SILMKMVPTSTRFSWESYNEAIPSSGDYGTFARDGFLEQISMTRDKTDYFWYLTDITISS
NEGFLKTGEDPLLTICSAGHALHVFVNGQLAGTSYGALSSPKLTFSQRIKLREGVNKLAI
LSTAVGLPDAGVHYETWNTGVLGPATLNGVNSGAWDMSKWKWSYKIGTKGEAMSLHTTTG
SSSVEWTEGSFVAVKQPLTWYKSSFNAPVGNEPLALDMNTMGKGQVWVNGHNIGRQWPAY
TAHGNCGRCNYAGIYNEKKCLSNCGQSSQRWYHVPRSWLKPSGNLLVVFEEWGGDPSGIS
VVKRTNK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggttataaattttagggataaagcttggatttttctggcgattatgtgtttttcattg
ttgatttgctcaactaaagcattggtctcttatgatcataaagctttaatcatcaatgga
cagaaaaggatccttctctctggttccatccactacccaagaagcacccctgagatgtgg
cctgatctgataaagaaggcccaagaaggtggtttagatgttatacaaacttatgttttc
tggaacggacatgaaccttctcctggacaatattattttggggatcggtatgatctggtt
aggttcatcaagctggtgcaacaagccggtctatatgttagcctgagaattggtccatat
gtttgtgccgagtggaatttcgggggaattcctgtctggctcaaatatgtccctggtatg
gttttcaggactgataatggacctttcaagactgcaatgcaaaaattcacaaagaagatt
gtggatataatgaaagaagaaaagttgtttgaaactcaaggaggacccatcattctctca
cagatagagaatgagtatggaccaatggaatgggagataggatcagcaggaaaggcatac
acaaaatggacagctgcaatggcgttgggtttgtccacaggtgtcccatgggttatgtgc
aagcaagatgatgctccttaccctattataaacacatgcaacgggttctattgtgagggt
ttcaaaccaaactcggtcgatcagcccaagatgtggacagagaactggactggttggttc
acggaatttggaggtgcgataccaaacagaccggtcgaagaccttgcgttctccgtggct
cgctttatacagaacggtggttcatttatgaattactatatgtaccatggagggacgaac
tttgatagaacatcgggcgagtttatcaccacaagctatgactacgatgctcctcttgat
gaatatggattactgagagaacccaagtatagtcatttgaaagagttgcataaagtcatc
aaactatgtgaacctgcgttggtctctgttgatcccaccattaattcgctcggcaataag
caagaagctcatgtgttcaagtccaagacttcttgtgctgcgtttctctcaaactacgac
acaagttatgcagcaaaagttatgtttagggggttcccatatgatttgcccccttggtct
atcagtatcttacctgactgcaaaaccgagtatcacaacactgcaaagattcgttcaccg
agcatacttatgaagatggttcctactagcacgcgattttcatgggaatcatacaacgaa
gcaatcccttcttcaggtgactatggtacgtttgctcgagatggttttttggaacaaata
agcatgaccagagacaaaacagactatttctggtatcttacagacattacaattagttct
aatgaggggttcttgaaaactggcgaagatccacttcttaccatttgttcagctggtcat
gctcttcatgtattcgttaatggtcagcttgcaggaactagttatggagcattgagcagc
cccaagctcacatttagtcaaaggatcaaattgcgcgaaggcgtcaacaaacttgctatc
ctaagtacggcagtgggtcttccggacgcaggtgtgcactatgagacttggaatactgga
gttctaggtccagccacactgaatggagttaactctggagcatgggacatgtctaagtgg
aaatggtcctataagatcggtaccaaaggtgaagctatgagccttcataccacaaccggg
agttcctctgtggaatggacagaaggatcattcgtggccgtgaagcaaccattgacctgg
tacaagtcttcttttaatgcgccggtaggcaatgaaccattggcattggacatgaacaca
atgggaaaaggacaagtttgggtaaatggacacaacataggacgtcaatggcctgcctac
acggctcatggtaactgcggacgctgcaactatgctgggatttacaacgagaagaaatgt
ctcagtaattgtggccaatcttctcaaagatggtaccatgtgcctcgttcatggcttaaa
ccatctgggaaccttctagttgtgtttgaggaatggggtggtgatccaagtgggatttct
gttgttaaaagaacaaacaaatga
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